Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01265 ATGGCCCTCTCCAAATCTCTCTCTGAATCTGATGTTTCTATACACTCCACATTCGCCTCTCCCTACGTTCGGAACTCTGCTCCAAGGTTCACCATCCCCAACAACTCCATGCCAAAAGATGTCGCCTTCCAAATCATCAACGACGAGCTTATGCTCGACCGCAACCCAAGGCTCAATCTAGCCAGCTTCGTCACTACTTGGATGGAACCCGAATGTGATATGCTCATCATGGACTCTATCAACAAAAACTACGTCGACATGGATGAATACCCCGTCACTACCGAGCTTCAAAAGCGTTGCGTCAACATGATTGCTAATCTCTTTAATGCACCCTTAGGAGACTCCGACGCCGCTGTATCGTCGGAGGCCATCATGCTAGCAGGGCTTGCGTTCAAGAGGAAGTGGCAGAACAAAAGGAAGGCGGAAGGGAAGCCTTATGATAAACCAAATATTGTGATGGGTGCCAATGTGCAAGTTTGTTTGGAGAAATTTGCGAGATACTTTGAGGTTGAGTTGAAGGAAGTTAAAGTGAGAGAAGGGTATTACGTGATGGACCCTGTTCAAGCCGTTGAGGTGGTGGATGAGAATACTATTTGTGTTGCTGCCATTTTGGGGTCAACTTACAATGGGGAATTTGAAGACGTGAAACTGTTGAATGATTTGTTGGTGGAGAAGAATAAAGTAAGTGGATGGGATACGCCTATTCATGTGGATGCTGCCAGTGGTGGATTCATAGCCCCATTTTTGTATCCAGAGCTTGAATGGGACTTCAGGCTTCCTTTGGTGAAGAGCATCAATGTGAGTGGACATATCTATGCCGGAATTGGTTGGGTTATTTGGAGAACGAAAGAAGATTTTCCTGAAGAACTCATTTTCCACATCAATTACCTTGGGGCGGATCAACCCACTTTCACTCTCAACTTCTCCGAAGAACTGTCACGACAAGACAATGCAATGGTGTTGAAGGAAGGGCTTGAGAAAACAGGGAGGTTCAGGATAGTGTCAAAGAAGATGGGAGTGCCAGTGGTGGCATTTTCTCTCAAAGACCGAAGCTGCCACGAGGAGTTTAAGGTGTCAAAGATGCTGCGGCGGTTCGGGTGGATAGTGCCAGCGTATCCGATGCCAGAGGGGGCAAAGGACGTGTTGGTTCTTCGTGTGGTGATTAGAGAAGATTTCTCTGGCACGTTGGGGGACAGGCTTGTGTTGGATATCGTAAAAGTAATGGGAGAGTTAGATAGTAGTATTCCTATTCCACCAAAGAAGAGTGAGAGAATGGTGAGGTTAGAAGATGGTAAAAAGGAAACGAGTGAGAAGAAGACGGCAGAGGTAACTACAAAGAGGGAAATAGGGAGTTATTGGGGGAATATAACAAGTGGTAGGTCGAAAGTCAAGCTTGCTGCCAATGTGGGTGGTGGTTCAGTTAATGTAGTTGCCTAA 1437 46.35 MALSKSLSESDVSIHSTFASPYVRNSAPRFTIPNNSMPKDVAFQIINDELMLDRNPRLNLASFVTTWMEPECDMLIMDSINKNYVDMDEYPVTTELQKRCVNMIANLFNAPLGDSDAAVSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVMGANVQVCLEKFARYFEVELKEVKVREGYYVMDPVQAVEVVDENTICVAAILGSTYNGEFEDVKLLNDLLVEKNKVSGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHIYAGIGWVIWRTKEDFPEELIFHINYLGADQPTFTLNFSEELSRQDNAMVLKEGLEKTGRFRIVSKKMGVPVVAFSLKDRSCHEEFKVSKMLRRFGWIVPAYPMPEGAKDVLVLRVVIREDFSGTLGDRLVLDIVKVMGELDSSIPIPPKKSERMVRLEDGKKETSEKKTAEVTTKREIGSYWGNITSGRSKVKLAANVGGGSVNVVA 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 17516587 17518486 - MELO3C005222.2.1 Cme09g01265 338125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01265 478 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 310 IPR002129 GO:0016830|GO:0019752|GO:0030170
Cme09g01265 478 PANTHER GLUTAMATE DECARBOXYLASE 315 461 IPR010107 GO:0004351|GO:0006536|GO:0030170
Cme09g01265 478 PANTHER GLUTAMATE DECARBOXYLASE 315 461 - -
Cme09g01265 478 PANTHER GLUTAMATE DECARBOXYLASE 1 312 - -
Cme09g01265 478 PANTHER GLUTAMATE DECARBOXYLASE 1 312 IPR010107 GO:0004351|GO:0006536|GO:0030170
Cme09g01265 478 Gene3D - 1 65 - -
Cme09g01265 478 Gene3D - 330 414 - -
Cme09g01265 478 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 310 IPR010107 GO:0004351|GO:0006536|GO:0030170
Cme09g01265 478 Gene3D - 66 329 IPR015421 GO:0003824
Cme09g01265 478 SUPERFAMILY PLP-dependent transferases 16 411 IPR015424 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g01265 Cme-Chr9:17516587 Cme09g01267 Cme-Chr9:17534463 0 dispersed
Cme09g01265 Cme-Chr9:17516587 Cme09g01266 Cme-Chr9:17519935 3.95E-22 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01265 K01580 - csv:101214676 810.446