Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01275 ATGGCGGGAGTAGAATTGCTGGACATATTTCCTCATCGGGACCTGGAAGAGGGAGCCATTTCCTCTTCTGATTGGAATCCAACTGATGCTGTGCTGTTTGTTGGACTGAGTTTGGTACTTGGAATTGCTTGCAGACACCTATTGCGAGGCACTAGAGTTCCTTATACAGTTGCTTTGCTTGTTCTTGGCATAGTTCTTGGATCTATTGAATATGGCACTCATCATCGATTGGGAAAGATAGGGGACGGCATACGTCTCTGGGCAAAAATTGATCCTGATTTACTACTGGCTGTTTTCCTCCCTGCTTTGCTGTTCGAGAGTTCCTTTTCAATGGAAGTGCACCAAATAAAGAGGTGTCTGGCCCAAATGATCTTATTGGCTGGTCCAGGTGTTTTAATTTCAACCTTCTTGCTAGGATCCGCTTTCAAGCTTACTTTCCCGTATAATTGGAGTTGGAAAACTTCATTGTTGCTTGGGGGACTTCTGAGTGCCACAGATCCTGTGGCTGTTGTGGCTCTATTGAAAGAGCTAGGAGCAAGTAAAAAACTGAATACAATAATAGAAGGAGAATCCTTGATGAATGATGGGACAGCAATTGTGGTTTATCAACTTTTTTATCAAATGGTTCTTGGAAAGAGCTTTAACTGGGGAGCTATAATCAAATATCTAACACAAGTCTCGCTGGGAGCTTTGGGAATTGGTCTTGCTTTTGGGATTGCATCTGTTTTATGGCTCGGGTTCATTTTCAACGACACAGTGATAGAGATTGCTTTAACACTAGCTGTGAGCTATATTGCTTATTTCACTGCTCAAGAGGGTGCTGATGTTTCGGGTGTTTTGACAGTGATGACTTTAGGAATGTTTTATGCTGCAGTCGCAAGAACAGCTTTTAAGGGTGACGGTCAACAAAGCTTGCATCATTTTTGGGAAATGGTTGCTTACATAGCGAATACGTTAATTTTCATATTGAGTGGAGTTGTTATCGCTGAAGGTGTTCTTGGAAGCGAAGGAATTCTTGATAATGGAGCTTCATGGGGCTACCTCATTCTACTTTATGTGTTTGTGCAAGCTTCTCGATTTATAGTTGTTGGAGTATTGTATCCATTTCTGCGGTATTTTGGATATGGCTTGGATTGGAAAGAAGCTACAATACTAATATGGTCAGGTCTGCGTGGAGCTGTTGCTCTGTCACTTTCACTGTCAGTTAAGCGATCAAGTGACCAATCATTGTACATCAGTTCAGAAACTGGAACTCTGTTTGTTTTTTTCACGGGTGGAATTGTATTCTTGACGCTTATTGTAAATGGTTCGACCACACAATTCATTTTACATCTTCTCAACATGGACAAGCTCTCCATGGCTAAGAAACGTATATTGGATTATACAAAATACGAGATGCTGAACAAAGCATTGGGCGCCTTTGGAGATCTTGGAGATGATGAGGAATTGGGACCTGCAGACTGGGCTACAGTTAAAAGACATATTACGAGTCTCAGTCACGTGGAGGGGGAGCCACTGCACCCTCACAATGCATTTGAAAGTGATCAAAATGTCCGATTTATGAATTTGAGAGACATTCGTCTGCGACTTTTGAATGGTGTTCAAGCTGCTTACTGGGGTATGCTTGATGAGGGAAGGATAACACAAAGTACTGCCAATATCTTGATGCAATCTGTGGATGAAGCCCTTGATCAGGTTGCATATGAGCCCTTATGTGATTGGAAAGGTTTAAAGTCTAATGTCCACTTTCCAAACTATTACAAGTTCTTCCAGACAAGCGTTTTCCCTCAGAAGTTGGTTACATATTTCACTGTGGAAAGATTAGAGTCCGGATGTTATATTTGTGCTGCATTTCTTCGTGCACATCGAATTGCAAGACAGCAGCTTCATGAGTTTATAGGTGATAGTGATATTGCTTCTACTGTAATTAATGAAAGTGAAGCTGAGGGTGAAGAAGCACGAAATTTTCTAGAAGATGTTCGTGAGACATTTCCTCAGGTTTTGCGTGTTGTTAAAACCAGACAAGTAACATATTCGGTGCTCAACCATTTAATTGAATATGTCCAAAATCTGGAGAAGGTTGGCCTATTAGAAGAGAAAGAGATGTTGCATCTTCATGATGCTGTTCAGACCGACTTGAAAAGGCTTCTACGAAATCCTCCTTTGTTAAAGATTCCAAAAATGCGGAACTTAATCAGTGCCCATCCATTTCTTGGGGCACTTCCTCCTTTAGTGCGCGAACCACTTGAAGTTTCAACAAAAGAAGTGATGAAACTACGTGGTGTAACACTTTACAAGGAAGGTTCAAAGCCTAGTGGGGTTTGGCTTATATCCAACGGAGTGGTAAAGTGGATAAGTAAGAGCATGAGAAACAAGTTCTCCTTGCACCCCACATTTACTCATGGAAGCACTTTGGGCCTATATGAATTGCTTACTGGGAAGCCATGCCTCTGTGACATGATTACAGATTCTGTTGTTCTCTCTTTTTTTATTGAACATGACAAGTTTCTTTCAATACTTAGATCAGACCCTTCGGTTGAAGACTTCTTGTGGCAGGAAAGTTCCATTGTTCTTGCCAAACTTTTGCTTCCACAAGTATTTGAGAAAATGGAAATGAGAGATCTGAGAGTTCTTGTTGTTGAAAGGTCAGTAATGACTACGCATATAGCAGGAGAAACAATAGAAATTCCACCCCATTCTATTGGCCTTTTGTTGGAAGGATTTATCAAAAGTCATGGCATCCAAGAGGAACTTATTGCATCACCTGCTGTATTGTTCTCGCACAGGAATCCAAGCTTCCACAATATGGAAAACTCAGGGATGAGTGGTTCTAGTTTTTCTCATCAAGGTTCCTATTATGAAGTTGAAACAAGATCAAGAGTGATCGTTTTTGACATGGCTGCCCTTCAATCAGATGAAAATCTAAATCGGTCGTCATCTTTTATTCATTCTCTTGATCACCCTCAAAGATCTCTAAGCAGAGATCACTCAGGTCTTATGAGTTGGCCTGAAATGCTTTCTAAACCTAGACCACCACAGAAGCAGAAATCTGAACGAACTGAGCGTCCAGCTCATAGCTTGTCTGCAAAGGCCATGCAACTAAGCATATACGGTAGCATGGTTGATTTTCGTCAGCGGACTAAGAGTTTTCCTGGCAATGTTACGGAACCATCTCATAGCCGGTCGAATCCTGTGATTGGTTCACATAAAGGTGTTTCCCTTCCATATGTAAAATCAGAAGGAGCTGCTACATTGAAGAAGAGGCTTGATGCAAGAAAGTTACCAATAAGCAACGTTAGACCCCCACAAGAAAAAGCACTTCCTAATGAGAGAAATGTAAGGGATGATTCAAGTGAGGAATCGGGTGGTGAGGATGATGTGATAGTAAGAATTGATTCACCAAGTGTGCTTTCATTTCACCAGGTACCATGA 3432 41.38 MAGVELLDIFPHRDLEEGAISSSDWNPTDAVLFVGLSLVLGIACRHLLRGTRVPYTVALLVLGIVLGSIEYGTHHRLGKIGDGIRLWAKIDPDLLLAVFLPALLFESSFSMEVHQIKRCLAQMILLAGPGVLISTFLLGSAFKLTFPYNWSWKTSLLLGGLLSATDPVAVVALLKELGASKKLNTIIEGESLMNDGTAIVVYQLFYQMVLGKSFNWGAIIKYLTQVSLGALGIGLAFGIASVLWLGFIFNDTVIEIALTLAVSYIAYFTAQEGADVSGVLTVMTLGMFYAAVARTAFKGDGQQSLHHFWEMVAYIANTLIFILSGVVIAEGVLGSEGILDNGASWGYLILLYVFVQASRFIVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLSVKRSSDQSLYISSETGTLFVFFTGGIVFLTLIVNGSTTQFILHLLNMDKLSMAKKRILDYTKYEMLNKALGAFGDLGDDEELGPADWATVKRHITSLSHVEGEPLHPHNAFESDQNVRFMNLRDIRLRLLNGVQAAYWGMLDEGRITQSTANILMQSVDEALDQVAYEPLCDWKGLKSNVHFPNYYKFFQTSVFPQKLVTYFTVERLESGCYICAAFLRAHRIARQQLHEFIGDSDIASTVINESEAEGEEARNFLEDVRETFPQVLRVVKTRQVTYSVLNHLIEYVQNLEKVGLLEEKEMLHLHDAVQTDLKRLLRNPPLLKIPKMRNLISAHPFLGALPPLVREPLEVSTKEVMKLRGVTLYKEGSKPSGVWLISNGVVKWISKSMRNKFSLHPTFTHGSTLGLYELLTGKPCLCDMITDSVVLSFFIEHDKFLSILRSDPSVEDFLWQESSIVLAKLLLPQVFEKMEMRDLRVLVVERSVMTTHIAGETIEIPPHSIGLLLEGFIKSHGIQEELIASPAVLFSHRNPSFHNMENSGMSGSSFSHQGSYYEVETRSRVIVFDMAALQSDENLNRSSSFIHSLDHPQRSLSRDHSGLMSWPEMLSKPRPPQKQKSERTERPAHSLSAKAMQLSIYGSMVDFRQRTKSFPGNVTEPSHSRSNPVIGSHKGVSLPYVKSEGAATLKKRLDARKLPISNVRPPQEKALPNERNVRDDSSEESGGEDDVIVRIDSPSVLSFHQVP 1143
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 17597423 17627963 - MELO3C005228.2.1 Cme09g01275 338135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01275 1143 CDD CAP_ED 737 846 IPR000595 -
Cme09g01275 1143 ProSiteProfiles cAMP/cGMP binding motif profile. 737 840 IPR000595 -
Cme09g01275 1143 MobiDBLite consensus disorder prediction 1048 1071 - -
Cme09g01275 1143 Pfam Sodium/hydrogen exchanger family 32 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cme09g01275 1143 PANTHER SODIUM/HYDROGEN EXCHANGER 25 971 IPR018422 GO:0006812|GO:0015299|GO:0016021
Cme09g01275 1143 MobiDBLite consensus disorder prediction 985 1028 - -
Cme09g01275 1143 MobiDBLite consensus disorder prediction 1011 1025 - -
Cme09g01275 1143 SUPERFAMILY cAMP-binding domain-like 723 851 IPR018490 -
Cme09g01275 1143 MobiDBLite consensus disorder prediction 1048 1067 - -
Cme09g01275 1143 Gene3D - 151 203 - -
Cme09g01275 1143 Gene3D Jelly Rolls 701 863 IPR014710 -
Cme09g01275 1143 MobiDBLite consensus disorder prediction 1093 1130 - -
Cme09g01275 1143 MobiDBLite consensus disorder prediction 1107 1127 - -
Cme09g01275 1143 PANTHER - 25 971 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g01275 Cme-Chr9:17597423 Cme12g00785 Cme-Chr12:14232255 4.94E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01275 - - csv:101209966 2152.1