Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01298 ATGGACCCTATGGAGAGGGCAAATTTTAGGCACACTGCTTCTACAATTGCTGTCTTTGCTCATATTTCTGGTCTCACTGCCTGCATTCTTATGCTTGTTTGGTTGCTGCATTATCGCGGCGGCCTTGCATACGATTCTCCCGATGCCAACCTTGTCTTTAATTGTCACCCATTCTTCATGCTCCTCGGTTTCGTGTTCATGTCGGGCGAAGCCATGATGGCCTACAGAACAGTGAGGGCAGAAAAGATAACAAAGAAGATAGTTCACATGGGTCTGCATCTGGTAGCTATTTGCATGGGAATTATAGGGATAAATGCTGCTTTCAAATTTCATGATCAAGTGAACTTGGAGGATATGTATAGTTTACATTCATGGATTGGTATAGTCACTTTTTGCCTTTACGGTTTACAGTGGCTGTTGGGACTATTTACATTCTTGTTTCCCGGAGCAGATGCAATGACTAAAACTAGGTTACTGCCATGGCACATAAGTGGGGGAAGAGCTCTTTTAATGATGATAATATGCACCGCGTTGACTGGCTTGTCCGAGAAGGCTACTTCCTTGAGACTGACTGGCAGCCATGAATCCCGTTTGTTTAACTTCACTGCTTTCTTCGTCCTCCTCTTTGGCATTTCCATCGACATCTCCATTAGTTTTGCACGATTTATGCACGTTGATCACACCATTTAG 690 43.91 MDPMERANFRHTASTIAVFAHISGLTACILMLVWLLHYRGGLAYDSPDANLVFNCHPFFMLLGFVFMSGEAMMAYRTVRAEKITKKIVHMGLHLVAICMGIIGINAAFKFHDQVNLEDMYSLHSWIGIVTFCLYGLQWLLGLFTFLFPGADAMTKTRLLPWHISGGRALLMMIICTALTGLSEKATSLRLTGSHESRLFNFTAFFVLLFGISIDISISFARFMHVDHTI 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 17985551 17988845 + MELO3C005246.2.1 Cme09g01298 338158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01298 229 Gene3D - 10 221 - -
Cme09g01298 229 CDD Cyt_b561_ACYB-1_like 46 188 - -
Cme09g01298 229 ProSiteProfiles Cytochrome b561 domain profile. 19 218 IPR006593 -
Cme09g01298 229 Pfam Eukaryotic cytochrome b561 56 186 IPR006593 -
Cme09g01298 229 SMART 561_7 55 181 IPR006593 -
Cme09g01298 229 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 1 220 - -
Cme09g01298 229 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Cme09g01298 229 PANTHER CYTOCHROME B561-RELATED 1 220 IPR043205 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00023 Cme-Chr4:159143 Cme09g01298 Cme-Chr9:17985551 2.52E-58 dispersed
Cme09g01298 Cme-Chr9:17985551 Cme10g01545 Cme-Chr10:19760460 1.64E-37 dispersed
Cme09g01298 Cme-Chr9:17985551 Cme09g00161 Cme-Chr9:1234506 6.12E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01298 K08360 - csv:101208884 437.958