Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01426 ATGAGTGGCGGTGCTGGTGGCACTTCTCGAAGCACTAGGGATTTGATCTGCAACGCCGGTGCTGGTGCTGCTGCAGGTTCTATAGCAGCCACGTTCGTCTGCCCTTTAGATGTCATCAAGACGAGGCTGCAAGTGCATGGTCTTCCTTCTGGTCAAAGAGGAGTTCAACGACAAGTGGGGTGGAAGGATTCCATGAATTATATTTCTTTAATCTCCGTTGTTCTCTACCCAGGTAGCATTATTGTCACTAGCCTACAAGGCATAATGCGTTCTGAAGGTTTCAGGGGATTGTATCGTGGCCTTTCTCCAACAATAGTAGCACTTCTTCCAAACTGGGCTGTGAGGGACGTTGGTCATCAACTCTCATTTGGGGCAAATATGGTTGCTGCTGCTGGGGCTGGGGCATCTACTGCCATTGCAACAAATCCTTTGTGGGTTGTTAAGACCCGACTGCAAACACAGGGAATGAGGCCTGGTGTGGTTCCTTACACAGGCATGGTTTCAGCATTTACCAGGATCGTACATGAAGAAGGATTTCGCGGGCTTTACAGTGGTATCATCCCTTCATTGGTTGGGATAAGTCATGTTGCAATTCAATTTCCCGCATACGAAAGGCTCAAATCATATATCGCAAAAAGAGATAACACAACCGTTGACAAACTAAGTCCAGGACATTTAGCTATTGCCTCCTCGTTGTCAAAAGTTACGGCCTCGGTAATGACTTACCCACATGAGGTAGTTCGTTCCCGGCTACAAGAGCAAGGCCAAGCCAGAAACATTGCTCCTCAATACTCAGGAGTAATGGACTGTATCAAAAAGGTTTTTCGAAAGGAAGGCGTCCCAGGTTTCTATAGAGGTTGTGCGACGAATCTGTTGCGAACAACTCCATCTGCTGTAATAACTTTCACCAGCTATGAAATGATACATCGGTTCCTACTGCGAGTTATAACTTCTGGCGAGGATAAGTATTCAGAAACCCATCCAAAGTCCGATAGCAATAGTCATGTGAAGCCCCAAAAGGCGAACATAGACGATGCAAACAAAGGTAGTGATTCCGATATACAACAATCACAATCCCAACCAAATGGATGTGCTCAAGATTACATGGGCAGTCCAAAAATGTGA 1125 46.13 MSGGAGGTSRSTRDLICNAGAGAAAGSIAATFVCPLDVIKTRLQVHGLPSGQRGVQRQVGWKDSMNYISLISVVLYPGSIIVTSLQGIMRSEGFRGLYRGLSPTIVALLPNWAVRDVGHQLSFGANMVAAAGAGASTAIATNPLWVVKTRLQTQGMRPGVVPYTGMVSAFTRIVHEEGFRGLYSGIIPSLVGISHVAIQFPAYERLKSYIAKRDNTTVDKLSPGHLAIASSLSKVTASVMTYPHEVVRSRLQEQGQARNIAPQYSGVMDCIKKVFRKEGVPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLLRVITSGEDKYSETHPKSDSNSHVKPQKANIDDANKGSDSDIQQSQSQPNGCAQDYMGSPKM 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 19462240 19466568 - MELO3C005344.2.1 Cme09g01426 338286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01426 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 311 IPR018108 -
Cme09g01426 374 SUPERFAMILY Mitochondrial carrier 14 307 IPR023395 -
Cme09g01426 374 MobiDBLite consensus disorder prediction 322 374 - -
Cme09g01426 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 209 IPR018108 -
Cme09g01426 374 MobiDBLite consensus disorder prediction 348 366 - -
Cme09g01426 374 Gene3D Mitochondrial carrier domain 5 115 IPR023395 -
Cme09g01426 374 Gene3D Mitochondrial carrier domain 116 321 IPR023395 -
Cme09g01426 374 PRINTS Mitochondrial carrier protein signature 230 252 IPR002067 GO:0055085
Cme09g01426 374 PRINTS Mitochondrial carrier protein signature 18 31 IPR002067 GO:0055085
Cme09g01426 374 PRINTS Mitochondrial carrier protein signature 136 154 IPR002067 GO:0055085
Cme09g01426 374 PRINTS Mitochondrial carrier protein signature 31 45 IPR002067 GO:0055085
Cme09g01426 374 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Cme09g01426 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 108 IPR018108 -
Cme09g01426 374 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 320 IPR044712 GO:0006862|GO:0055085
Cme09g01426 374 Pfam Mitochondrial carrier protein 222 313 IPR018108 -
Cme09g01426 374 Pfam Mitochondrial carrier protein 18 114 IPR018108 -
Cme09g01426 374 Pfam Mitochondrial carrier protein 120 213 IPR018108 -
Cme09g01426 374 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 10 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02233 Cme-Chr1:31013632 Cme09g01426 Cme-Chr9:19462240 1.45E-109 dispersed
Cme08g00891 Cme-Chr8:5848533 Cme09g01426 Cme-Chr9:19462240 8.53E-13 dispersed
Cme09g01426 Cme-Chr9:19462240 Cme11g01997 Cme-Chr11:27912945 5.66E-34 dispersed
Cme10g01042 Cme-Chr10:8692352 Cme09g01426 Cme-Chr9:19462240 1.41E-17 dispersed
Cme09g01426 Cme-Chr9:19462240 Cme03g01623 Cme-Chr3:25107705 2.86E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01426 K15115 - csv:101216902 590.497