Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01449 ATGGCAGCTTCTCGGGTGGCTGGAGGATTAGCGCAATCTTCCTCAAGTTCTGGGATTTTTTTCCAAGGAGATGGGCAGTCCAAGGCTACCGTTAAATCTCACTTGGGCTCATCTTATGGAAACTCATCAAATTCAATTCCAGGAACTGGCCAATCAAATTTGGGTCCAGTTTCTGGGGACACAAATGGTGTCTTTAATAGTGTGGCAAACTCGGGACCAAGTGTTGGGGCAAGTTCTTTGGTTACAGATGCAAACTCTGCTCTTTCAGGTGGGCCTCACTTGCAGAGAAGTCCAAGTATGAATGCAGAATCATACATGCGATTACCTACATCGCCTATGTCTTTTACATCAAATAACATGAGTATCTCAGGTGCATCGCTCATTGATGCATCTTCTGTACTGCAGCACAATTCTCAGCAGGATCATAATGCTTCCCAGATGCACACCCAGGCACAGGCCCGGCAAGTTTCTTCAGGTGATGCATCACTGTCGAATTCACAAACCGTTCAAGCTTCACTACCCATGGGTGCACGAGTCTCTGGATCTCTCATGACAGATCCCAATAGTTATTCTCAGTCACAGAAGAAACCACGTTTGGATATTAAGCAGGATGATTTTCTGCAACAGCAGGTTTTACAACAGCTACTGCAGAGACAAGATTCCATGCAATTGCAAGGTCGTAATACGCCTCAGTTACAAGCAGCATTGTTTCAGCAGCAACAGAGACTACGGCAGCAACAACAAATTTTTCAGTCTTTACCTCCTTTGCAGAGAGCTCATATGCAGCAGCAGCAGCAGATACAGTTGAGGCAGCAGCTTCAGCAACAGGCAGTACAGCCTGTAAATGCTATGAAGCGGCCTCATGATGGTGGTGTATGTGCTCGGCGGCTAATGCAGTACCTATACCATCAGCGTCAAAGGCCTGCAGATAATAGTATTGCCTATTGGAGGAAGTTCGTGACTGAATATTATTCTCCTCGTGCAAAGAAAAGATGGTGTTTGTCATTATATAATAATGTTGGACATCATGCACTTGGTGTTTTCCCTCAAGCAGCTATGGATGCATGGCAGTGTGACATTTGTGGATCAAAATCTGGACGGGGATTTGAGGCTTCCTTTGAAGTCCTTCCTAGACTCAATGAGATCAAATTTGGCAGTGGAGTCATTGATGAGCTATTGTTCTTAGATATGCCACGGGAATTCAGATATTCATCTGGAATTATGATGTTAGAATATGGAAAAGCGGTTCAAGAGAGTGTGTATGAGCAACTTCGTGTGGTTCGTGAGGGACAGCTTCGTATCATATTTACTCATGAACTGAAGATATTGGCATGGGAATTTTGTGCAAGACGACATGAAGAACTTCTTCCTCGTAGACTGGTTGCACCTCAGGTAAATCAATTGGTCCAGGTGGCACAGAAATGCCAGAGCACTATTGCTGAAGGAGGATCTGATGGGGCTTCTCAGCAGGACTTACAAGCAAATAGTAATATGGTTTTGACAGCTGGGCAGCAGCTTGCTAAGAGTCTGGAGTTGCAGTCGCTGAATGATTTGGGGTTCTCTAAAAGATACGTTAGATGCTTGCAGATATCAGAGGTTGTCAATAGCATGAAAGATTTGATCGATTTCTGTAGGGAGCAGAAAACCGGGCCAGTTGAGGGTTTGAAAAGTTATCCTCAACACGCCACAGCGAAGCTGCAGATGCAAAAAATGCAAGAGATTGAACAGGTTGCTAATGCTCAGGGTATGCCAACGGACCGTAACACCCTTAGTAGAATGGTCTCTCTGCATCCTGGGCTGAACAACCAAATGAGTAGCCAAAATCAACTAGTCGGCAGAGGAACTTTGAGCGGTTCGGCACAAGCTGCGTTGGCGTTGTCTAACTACCAGAATCTCCTAATGAGACAGAACTCAATGAATTCAACAAGTTCACATGCACTCCAGCAGGAGACATCATCGTCATTCAATACTTCAAACCAGAGTCCTTCATCAAGCTTTCATGGGACAACCGCTATAACATCGGCACCAATGCAGAACTTGCCCAGCAGTGGTCTTTCAAGTCCTAATTTGCCTCAGCAACAATCTCAAGTTCAACACCAACTGCATCAGCGGCCGAACACCAACAACTTACTTGGGCAGAGTACGCAAGGTAACAGTAACAATAATCAGGCTATGCAACATCAGATGATCCAGCAATTACTCCAGATATCTAATAACAGTGGGGGAGGGCAACAGCAACAGCAACTGCAGCCGCAACAGCAACAGCAACTGCAGCCGCAACAGCAACCGCTTTCTGGATCAAACACAAAAGTAAGCGTTGGTGGAACTTATACAGGCTACGGAGCCGGCAGCTCTTCTGTGACGGCTGCAGGCACAGCCAATGCATCTTGTAGTAACACACCGGCCCCAAGCCGAAGTAATAGTTTTAAAAGTGCTTCAACTGGTGATGTATCAGCAGCAGCTGGTGCTCGTAGCAGCAGTGGGTTCAACCAAAGAAGTGCAGATTTGCCACAAAATCTTCAATTGGATGATGATATAATCCAGGACATAGCCCATGATTTTACGGATAATGGGTTCTTTAACAATGATCTTGACGATAATATGTGCTTTGCCTGGAAAGGTTAA 2625 45.37 MAASRVAGGLAQSSSSSGIFFQGDGQSKATVKSHLGSSYGNSSNSIPGTGQSNLGPVSGDTNGVFNSVANSGPSVGASSLVTDANSALSGGPHLQRSPSMNAESYMRLPTSPMSFTSNNMSISGASLIDASSVLQHNSQQDHNASQMHTQAQARQVSSGDASLSNSQTVQASLPMGARVSGSLMTDPNSYSQSQKKPRLDIKQDDFLQQQVLQQLLQRQDSMQLQGRNTPQLQAALFQQQQRLRQQQQIFQSLPPLQRAHMQQQQQIQLRQQLQQQAVQPVNAMKRPHDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYNNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEASFEVLPRLNEIKFGSGVIDELLFLDMPREFRYSSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTHELKILAWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAEGGSDGASQQDLQANSNMVLTAGQQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCREQKTGPVEGLKSYPQHATAKLQMQKMQEIEQVANAQGMPTDRNTLSRMVSLHPGLNNQMSSQNQLVGRGTLSGSAQAALALSNYQNLLMRQNSMNSTSSHALQQETSSSFNTSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNLPQQQSQVQHQLHQRPNTNNLLGQSTQGNSNNNQAMQHQMIQQLLQISNNSGGGQQQQQLQPQQQQQLQPQQQPLSGSNTKVSVGGTYTGYGAGSSSVTAAGTANASCSNTPAPSRSNSFKSASTGDVSAAAGARSSSGFNQRSADLPQNLQLDDDIIQDIAHDFTDNGFFNNDLDDNMCFAWKG 874
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 19708414 19717056 - MELO3C005370.2.1 Cme09g01449 338309
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01449 874 MobiDBLite consensus disorder prediction 789 813 - -
Cme09g01449 874 Pfam LIM-domain binding protein 296 556 IPR029005 -
Cme09g01449 874 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 147 873 - -
Cme09g01449 874 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 149 - -
Cme09g01449 874 MobiDBLite consensus disorder prediction 135 175 - -
Cme09g01449 874 MobiDBLite consensus disorder prediction 182 196 - -
Cme09g01449 874 MobiDBLite consensus disorder prediction 1 59 - -
Cme09g01449 874 MobiDBLite consensus disorder prediction 640 721 - -
Cme09g01449 874 MobiDBLite consensus disorder prediction 8 59 - -
Cme09g01449 874 MobiDBLite consensus disorder prediction 135 198 - -
Cme09g01449 874 MobiDBLite consensus disorder prediction 739 772 - -
Cme09g01449 874 PANTHER LIM DOMAIN-BINDING PROTEIN 147 873 IPR029005 -
Cme09g01449 874 PANTHER LIM DOMAIN-BINDING PROTEIN 5 149 IPR029005 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cme06g00971 Cme09g01449 CCT
Cme06g00971 Cme09g01449 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00421 Cme-Chr3:5822509 Cme09g01449 Cme-Chr9:19708414 1.20E-114 transposed
Cme03g00586 Cme-Chr3:9213697 Cme09g01449 Cme-Chr9:19708414 3.11E-116 transposed
Cme06g00971 Cme-Chr6:6902210 Cme09g01449 Cme-Chr9:19708414 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01449 - - csv:101207744 1416.75