Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme09g01449 | ATGGCAGCTTCTCGGGTGGCTGGAGGATTAGCGCAATCTTCCTCAAGTTCTGGGATTTTTTTCCAAGGAGATGGGCAGTCCAAGGCTACCGTTAAATCTCACTTGGGCTCATCTTATGGAAACTCATCAAATTCAATTCCAGGAACTGGCCAATCAAATTTGGGTCCAGTTTCTGGGGACACAAATGGTGTCTTTAATAGTGTGGCAAACTCGGGACCAAGTGTTGGGGCAAGTTCTTTGGTTACAGATGCAAACTCTGCTCTTTCAGGTGGGCCTCACTTGCAGAGAAGTCCAAGTATGAATGCAGAATCATACATGCGATTACCTACATCGCCTATGTCTTTTACATCAAATAACATGAGTATCTCAGGTGCATCGCTCATTGATGCATCTTCTGTACTGCAGCACAATTCTCAGCAGGATCATAATGCTTCCCAGATGCACACCCAGGCACAGGCCCGGCAAGTTTCTTCAGGTGATGCATCACTGTCGAATTCACAAACCGTTCAAGCTTCACTACCCATGGGTGCACGAGTCTCTGGATCTCTCATGACAGATCCCAATAGTTATTCTCAGTCACAGAAGAAACCACGTTTGGATATTAAGCAGGATGATTTTCTGCAACAGCAGGTTTTACAACAGCTACTGCAGAGACAAGATTCCATGCAATTGCAAGGTCGTAATACGCCTCAGTTACAAGCAGCATTGTTTCAGCAGCAACAGAGACTACGGCAGCAACAACAAATTTTTCAGTCTTTACCTCCTTTGCAGAGAGCTCATATGCAGCAGCAGCAGCAGATACAGTTGAGGCAGCAGCTTCAGCAACAGGCAGTACAGCCTGTAAATGCTATGAAGCGGCCTCATGATGGTGGTGTATGTGCTCGGCGGCTAATGCAGTACCTATACCATCAGCGTCAAAGGCCTGCAGATAATAGTATTGCCTATTGGAGGAAGTTCGTGACTGAATATTATTCTCCTCGTGCAAAGAAAAGATGGTGTTTGTCATTATATAATAATGTTGGACATCATGCACTTGGTGTTTTCCCTCAAGCAGCTATGGATGCATGGCAGTGTGACATTTGTGGATCAAAATCTGGACGGGGATTTGAGGCTTCCTTTGAAGTCCTTCCTAGACTCAATGAGATCAAATTTGGCAGTGGAGTCATTGATGAGCTATTGTTCTTAGATATGCCACGGGAATTCAGATATTCATCTGGAATTATGATGTTAGAATATGGAAAAGCGGTTCAAGAGAGTGTGTATGAGCAACTTCGTGTGGTTCGTGAGGGACAGCTTCGTATCATATTTACTCATGAACTGAAGATATTGGCATGGGAATTTTGTGCAAGACGACATGAAGAACTTCTTCCTCGTAGACTGGTTGCACCTCAGGTAAATCAATTGGTCCAGGTGGCACAGAAATGCCAGAGCACTATTGCTGAAGGAGGATCTGATGGGGCTTCTCAGCAGGACTTACAAGCAAATAGTAATATGGTTTTGACAGCTGGGCAGCAGCTTGCTAAGAGTCTGGAGTTGCAGTCGCTGAATGATTTGGGGTTCTCTAAAAGATACGTTAGATGCTTGCAGATATCAGAGGTTGTCAATAGCATGAAAGATTTGATCGATTTCTGTAGGGAGCAGAAAACCGGGCCAGTTGAGGGTTTGAAAAGTTATCCTCAACACGCCACAGCGAAGCTGCAGATGCAAAAAATGCAAGAGATTGAACAGGTTGCTAATGCTCAGGGTATGCCAACGGACCGTAACACCCTTAGTAGAATGGTCTCTCTGCATCCTGGGCTGAACAACCAAATGAGTAGCCAAAATCAACTAGTCGGCAGAGGAACTTTGAGCGGTTCGGCACAAGCTGCGTTGGCGTTGTCTAACTACCAGAATCTCCTAATGAGACAGAACTCAATGAATTCAACAAGTTCACATGCACTCCAGCAGGAGACATCATCGTCATTCAATACTTCAAACCAGAGTCCTTCATCAAGCTTTCATGGGACAACCGCTATAACATCGGCACCAATGCAGAACTTGCCCAGCAGTGGTCTTTCAAGTCCTAATTTGCCTCAGCAACAATCTCAAGTTCAACACCAACTGCATCAGCGGCCGAACACCAACAACTTACTTGGGCAGAGTACGCAAGGTAACAGTAACAATAATCAGGCTATGCAACATCAGATGATCCAGCAATTACTCCAGATATCTAATAACAGTGGGGGAGGGCAACAGCAACAGCAACTGCAGCCGCAACAGCAACAGCAACTGCAGCCGCAACAGCAACCGCTTTCTGGATCAAACACAAAAGTAAGCGTTGGTGGAACTTATACAGGCTACGGAGCCGGCAGCTCTTCTGTGACGGCTGCAGGCACAGCCAATGCATCTTGTAGTAACACACCGGCCCCAAGCCGAAGTAATAGTTTTAAAAGTGCTTCAACTGGTGATGTATCAGCAGCAGCTGGTGCTCGTAGCAGCAGTGGGTTCAACCAAAGAAGTGCAGATTTGCCACAAAATCTTCAATTGGATGATGATATAATCCAGGACATAGCCCATGATTTTACGGATAATGGGTTCTTTAACAATGATCTTGACGATAATATGTGCTTTGCCTGGAAAGGTTAA | 2625 | 45.37 | MAASRVAGGLAQSSSSSGIFFQGDGQSKATVKSHLGSSYGNSSNSIPGTGQSNLGPVSGDTNGVFNSVANSGPSVGASSLVTDANSALSGGPHLQRSPSMNAESYMRLPTSPMSFTSNNMSISGASLIDASSVLQHNSQQDHNASQMHTQAQARQVSSGDASLSNSQTVQASLPMGARVSGSLMTDPNSYSQSQKKPRLDIKQDDFLQQQVLQQLLQRQDSMQLQGRNTPQLQAALFQQQQRLRQQQQIFQSLPPLQRAHMQQQQQIQLRQQLQQQAVQPVNAMKRPHDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYNNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEASFEVLPRLNEIKFGSGVIDELLFLDMPREFRYSSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTHELKILAWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAEGGSDGASQQDLQANSNMVLTAGQQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCREQKTGPVEGLKSYPQHATAKLQMQKMQEIEQVANAQGMPTDRNTLSRMVSLHPGLNNQMSSQNQLVGRGTLSGSAQAALALSNYQNLLMRQNSMNSTSSHALQQETSSSFNTSNQSPSSSFHGTTAITSAPMQNLPSSGLSSPNLPQQQSQVQHQLHQRPNTNNLLGQSTQGNSNNNQAMQHQMIQQLLQISNNSGGGQQQQQLQPQQQQQLQPQQQPLSGSNTKVSVGGTYTGYGAGSSSVTAAGTANASCSNTPAPSRSNSFKSASTGDVSAAAGARSSSGFNQRSADLPQNLQLDDDIIQDIAHDFTDNGFFNNDLDDNMCFAWKG | 874 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 19708414 | 19717056 | - | MELO3C005370.2.1 | Cme09g01449 | 338309 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme09g01449 | 874 | MobiDBLite | consensus disorder prediction | 789 | 813 | - | - | |
Cme09g01449 | 874 | Pfam | LIM-domain binding protein | 296 | 556 | IPR029005 | - | |
Cme09g01449 | 874 | PANTHER | LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED | 147 | 873 | - | - | |
Cme09g01449 | 874 | PANTHER | LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED | 5 | 149 | - | - | |
Cme09g01449 | 874 | MobiDBLite | consensus disorder prediction | 135 | 175 | - | - | |
Cme09g01449 | 874 | MobiDBLite | consensus disorder prediction | 182 | 196 | - | - | |
Cme09g01449 | 874 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Cme09g01449 | 874 | MobiDBLite | consensus disorder prediction | 640 | 721 | - | - | |
Cme09g01449 | 874 | MobiDBLite | consensus disorder prediction | 8 | 59 | - | - | |
Cme09g01449 | 874 | MobiDBLite | consensus disorder prediction | 135 | 198 | - | - | |
Cme09g01449 | 874 | MobiDBLite | consensus disorder prediction | 739 | 772 | - | - | |
Cme09g01449 | 874 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 147 | 873 | IPR029005 | - | |
Cme09g01449 | 874 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 5 | 149 | IPR029005 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme06g00971 | Cme09g01449 | CCT | |
Cme06g00971 | Cme09g01449 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme03g00421 | Cme-Chr3:5822509 | Cme09g01449 | Cme-Chr9:19708414 | 1.20E-114 | transposed | |
Cme03g00586 | Cme-Chr3:9213697 | Cme09g01449 | Cme-Chr9:19708414 | 3.11E-116 | transposed | |
Cme06g00971 | Cme-Chr6:6902210 | Cme09g01449 | Cme-Chr9:19708414 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme09g01449 | - | - | csv:101207744 | 1416.75 |