Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01454 ATGTTGATTCCTTCATTTTCGATTCTTCTTCCATCTCTTCTTCTTCTACTTCCAATTTTCATTATTCTCAAACACATCAAATCTCCATCTTCAAAACTCCCACTTCCTCCTGGTCCAAATCCATGGCCAATCTTAGGAAATCTCCTTCAGATTGGTCAAAATGCTCACATTTCCATCACCCAATTTGCCAATATCTATGGCCCTTTAATCTCCCTCAAGCTTGGAGCTCAGCGTCTCATCGTCGCTTCTTCTCCGGCTGCCGCCACTGCAGTTCTCAAGACGCAAGACCGCCTTCTCTCCGCTCGATACATCTTCCAAATGACCCCTGATAGAGCACTCCACGATCAACACTCTCTTGTTTTCTCCCCTGAATGTGGAGATCAATGGAAGAATTTGAGGTCACTTTGTAAAGTGAACTTGTTTACGGCTAAAGCAATTGAATCACAAGCTATTTTGAGAGAGAAGAAGATGAAGGAATTAGTGAAATTTCTGGAATCAAAGCAAGGATCTGTTGTGGAGGTTAAGGATTTTGTCTTTACCTCTGTTTTCAATACACTTTCTAACTTGATTTTCTCGATGGATTTGCTTGATTTTGTTGGTGATGGGTTTAAGGGGATTAAAGGGCCTTTCAAGAAAATGATGGATTTGGGTTTGACTCCAAATTTGGCTGATTTTTATCCATTGTTGAGAAGGTTTGATCTTCAAGGTCTTAAAAATAAAGCTGACATTTACAAGAATGAAGTTGATTCTTTGTGGGGGATTCTTATTAAAGAAAGAAGAGAAATTCATTGTCAACAAGGTTCAGCTTCAAATGATTTCTTGGATGTCTTGATTCAAAGTGGATTCGATGATCAACAAATCAATGCCTTGATTATTGAATTGCTATCTGCAGGCACAGACACAACTACAACAACAGTGGAATGGGCAATGTCAGAGATTCTAAAAGACAAAGACATACTAAACAAAGTAAGAGAGGAAATGAAGAAGGTAACAAAGGAAAACCGGCCCATTGATGAATCCAACATTTCTGAGCTTCAATATCTATGGCGTTGTGTGAAAGAAACCCTAAGACTACACCCACCTGCCCCATTTCTTCTTCCACGCTTAGCTCCAATGGATTGCGAAGTTATGGGATACTCAATCCCAAAAGACAGTATGGTTTTTGTCAATGTTTGGGGAATTGGGAGAGACCCTTCAGTTTGGGAAGATTCTCAAACATTCAATCCTCAAAGATTTGATGTTGGTTGTGGTAATGATAATGTGGATTTTAAAGGGTATGATTATAGGTATTTGCCATTTGGTGGAGGAAGAAGAATTTGCCCTGGTCTTCCAATGGCCATTGTGCAAGTTCCTTTGATTTTAGCCACATTAATTCACAACTTTGAATGGTCGCTTCCTAATGATGAAGATTTATCAAAGTTGGATTTGAATGGAAGGCTTGGTGTAACATTGCAAAAATATGAAACTCTTAAACTTATTCCTAAAAGGAGGGTAATTTAA 1500 38.87 MLIPSFSILLPSLLLLLPIFIILKHIKSPSSKLPLPPGPNPWPILGNLLQIGQNAHISITQFANIYGPLISLKLGAQRLIVASSPAAATAVLKTQDRLLSARYIFQMTPDRALHDQHSLVFSPECGDQWKNLRSLCKVNLFTAKAIESQAILREKKMKELVKFLESKQGSVVEVKDFVFTSVFNTLSNLIFSMDLLDFVGDGFKGIKGPFKKMMDLGLTPNLADFYPLLRRFDLQGLKNKADIYKNEVDSLWGILIKERREIHCQQGSASNDFLDVLIQSGFDDQQINALIIELLSAGTDTTTTTVEWAMSEILKDKDILNKVREEMKKVTKENRPIDESNISELQYLWRCVKETLRLHPPAPFLLPRLAPMDCEVMGYSIPKDSMVFVNVWGIGRDPSVWEDSQTFNPQRFDVGCGNDNVDFKGYDYRYLPFGGGRRICPGLPMAIVQVPLILATLIHNFEWSLPNDEDLSKLDLNGRLGVTLQKYETLKLIPKRRVI 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 19782493 19785044 - MELO3C005375.2.1 Cme09g01454 338314

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01454 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Cme09g01454 499 PANTHER CYTOCHROME P450 71B11-RELATED 9 495 - -
Cme09g01454 499 Pfam Cytochrome P450 36 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01454 499 SUPERFAMILY Cytochrome P450 36 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01454 499 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01454 499 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01454 499 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01454 499 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01454 499 Gene3D Cytochrome P450 21 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01454 499 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01454 499 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01454 499 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01454 499 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01454 499 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01454 499 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01454 499 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01454 499 PANTHER (S)-N-METHYLCOCLAURINE 3'-HYDROXYLASE ISOZYME 1-LIKE 9 495 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01454 - - - csv:101208474 842.417
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01991 Cme-Chr7:25023185 Cme09g01454 Cme-Chr9:19782493 1.46E-25 dispersed
Cme09g01454 Cme-Chr9:19782493 Cme08g00812 Cme-Chr8:5381825 4.83E-105 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g606 . Blo15g00156 . . Bpe03g00135 Bpe07g00949 Bma10g01211 . . . . . . . . . . . . . . . . . Cla01g00545 . . . . . . . Cone5ag0838 . . . Csa05g00580 Chy09g00925 . Blo07g00422 Blo09g00081 Bda06g00671 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi09g00589 . . Cme09g01454
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000969 6 2 3 2 3 2 1 3 3 2 3 2 1 1 1 2 2 11 1 3 2 3 2 3 3 3 0 2 4 4 80