Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01488 ATGTCCAAATCATCTCCCCCCGATCATGACCCCTCTCCCTCCGCCGCCAAGCTCCGCAAGATCCCTCCCATCCCTGTACGCCGCGATTTCAAATCCAACGCAGGAGACTCCGATTCCGATTCCGACAATGAACATGATCTTACGGAGGATCGTCCTCTTCAATCTGAAGATTCCTCCATCATTATGGCGTCATCTCTTGGATTGAATCACATTCGGACGAGGTCTGCTCCCTTGCCGCTACGGACCTCTGCTGTTGGCACGCCTTCCAATTTGGGAGATAATTCCAGAAAAAATGTCACCGAGGGGACCGATTCTGAGCCAAAAGTTTCCTCCACTGAACCAGGTAGAAAAGTTCTTTGGAGTCAATCGAAATCGTTCAGACATCCGCCATCTGTGAATCATGATTTTGAGGGTAATCATGTAGCGTTTGGAAAGGAAATTCAGTCTCCACGGTTTCGTGCAATATTGCGTGTTACAAGTGGAAGAAGGAAGAGAACCCCTGATATCAAAAGCTTCTCTCACGAGCTCAATTCCAAGGGAGTTCGCCCTTTTCCACTTTGGAAACCTCGAGCACTTGGACATTTGGAAGAAATCATGGTGGCTATCAGAGAAAAATTTGACAGATTGAAGGATGATGTTAATAACGAACTGGGCATTTTTGCTGGAGATCTCGTAGATTTACTTGACAAGACAGACCACTCTCAGCCTGAACTAAGAAAGGGTTTAGAGGACTTATTGGTGATGTCTCGGAAATGTGCAACAATATCACCTGCAGATTTCTGGGCGGAAGGTGAAGGGATTGTCCAAAGTCTAGATGACCGGCGGCAGGAGCTGTCATTGGGGGTTCTTAAGCAAGCCCACACCCGTATACTCTTCATCCTGACACGATGTACTCGGCTGATTCAGTTCCGAAAGGAGAGTGGTTATGAAGATGACCACATTTTGGGTTTTCATCAACTTAGTGATCTAGGAATTTATCCAGAGAAAATGAGGCAGCTCGAACAACTTAACTTTGGTGATCCATTGACTGTGAAAGAGGAAATTGAGCAGCAGCTAAATTTGGTTGGTAAGGATCAAGCCAGTCACATTGTGAAGCAAGATTTAGGTCGAAGTTTTAGCAATAGTGCTGGAAATGTTGAGCTGGATTCTGCTTTAAGTGTTGATTCATCTACAAGTGTGAGGATGGCATCCTGGAAAAAGCTACCGTCAGCAGCTGAGAAGAACCGGAAAGACTCTGACTCTACTGGAACACCTTCCAGGGATAAACTTGAACTGTTGCATGAAAATGAAGCTAAGACTGGGAGCAACAACCAATTAGATACCCCATCTAATCATGTTGCGCATTTGGAAGCACCTCCTAAAGAACAAAAACTATCTTGGGGAATATGGGGTTATCATCAAAATGCCACGTTTGAAAATTTGATGATTTGTCGGATTTGTGAGGTTGAGATTCCGACCATTCATGTTGAGGAACATTCTCGAATATGTACAATTGCTGATAGGTGTGATTTGAAAGGTTTAACTGTGAATGAGCGCCTCGACCGGGTTGCTACAGCTCTTGAAAAGATACTAGAGTCTTGGACGCCTAAAAGTACACCAAGAAGTAGTGATACTTCCTGCGGAAATTTTGATACCATTAAGGTTTCTACATCAAGTATGCAAGAAGAGGTTTTTGTGCTGTCATCTAAAGGAATAAATTCGTCATGTCAAAACTCTGAAGATCTGCTTGATTCCCTTCCTGTTACTGGCAACTCCTCCTTTATGGAAAGTCAGGATATTTTTCCTGATTCATCATACAATCGGCAATTTATTTTCACACCAGATCACAGTACAAAATCAACTTCAGCTGGAACTCTCACACCAAGATCACCTCTTTTAACGCCCAGATCCAGCCAGATTGAATTGTTGTTGCATGGGCGAAAAGCAATATCTGAACTTGAAAATTATCAGCAGATTTACAAATTATTGGATATTGTTCGTTCCATTGCAAATGTTAATAACTCTGGTTATGGTGCATTGGAGTCTATGCTTGATCGATTAGAGGACCTTAAATATGCAATCCAGGATAGGAAGGTGGATGCCCTTGTTGTGGAAACTTTTGGAAGGCGCATAGAGAAGCTATTGCAGGAAAAATATGTACATTTTTGTGGGCAAATTGAAGATGATAAATTAGAATCTTCACATGGCATGGTTGATGAAGAGAGTTCAGTGGAAGATGATACTGTCCGTAGTTTGCGTGCAAGTCCTGTCAACAAATGCTCAAAAGATCGTACATCTATTGAAGATTTTGAAATAATTAAGCCAATTAGTAGAGGGGCATATGGCCGAGTTTTTCTTGCCAGAAAAAGAGCAACTGGAGACTTGTTTGCAATAAAGGTTTTAAAGAAGGCTGATATGATTCGCAAGAATGCAGTTGAAAGTATTTTGGCTGAACGCAATATCCTTATCTCAGTTCGCAACCCTTTTGTGGTCCGCTTTTTCTACTCTTTCACATGTAGGGAAAATCTGTATCTGGTCATGGAGTACTTAAATGGTGGTGATATTTATTCCTTACTGAGAAACCTAGGATGCTTAGACGAAGATATGGCTCGTATTTATATCGCTGAAATTGTTCTAGCTTTGGAGTATTTGCACTCCTTAAATGTGATTCACAGAGACTTAAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAGTTGACAGACTTTGGGCTCTCCAAGATTGGTCTTATCAATAGTACAGATGATTTCTCAGGTCCATCAGTCAGTGGACCTGATTCACTTGGAGACAATGGACCAGCATCTTTGTCAAAAAGAGAACACAGACAAAAGCAGTCGGTAGTCGGTACTCCAGATTATTTGGCTCCTGAGATACTTCTGGGCATTGGACATGGTGTAACTGCGGATTGGTGGTCTGTTGGAGTAATTCTTTTTGAGATGCTTGTAGGAATACCGCCGTTCAATGCAGAGAATCCACAGCAAATTTTTGATAATATCATTAACAGAGACATACCATGGCCCAAGGTGCCTGACGAGATGAGTTATGAAGCCCATGATTTGATTGACAAATTGCTGACTGAAAATGCAGTTCAAAGACTGGGAGCTACTGGAGCCAGAGAGGTGAAAGAGCATCCTTTCTTCAAAGATATTAACTGGGAAACCCTTGCAAGGCAGAAGGCCATGTTTATACCATCAGCAGAGCCACAGGATACAAGTTATTTCATGAGTCGTTATATATGGAATCCAGAAGATGAGGATTTCAATGGTGGAAGTGATTTTGATGATCATGATTTGACTGATACTTGCAGCAGTAGTTCATTCAGTAACCTACAAGATGAAGACGCAGACGAATGTGGTAGTTTGACTGACTTCTGTACATCAGCCCTTGCTGTGAAGTACTCGTTCAGCAATTTCTCTTTCAAGAATTTATCGCAACTGGCTTCCATCAACTACGATTTGGTTGTGAAGAGCAGTCAAAATTCACCAGATGTATCAAAACCATCCGTTCCTTGA 3519 42.11 MSKSSPPDHDPSPSAAKLRKIPPIPVRRDFKSNAGDSDSDSDNEHDLTEDRPLQSEDSSIIMASSLGLNHIRTRSAPLPLRTSAVGTPSNLGDNSRKNVTEGTDSEPKVSSTEPGRKVLWSQSKSFRHPPSVNHDFEGNHVAFGKEIQSPRFRAILRVTSGRRKRTPDIKSFSHELNSKGVRPFPLWKPRALGHLEEIMVAIREKFDRLKDDVNNELGIFAGDLVDLLDKTDHSQPELRKGLEDLLVMSRKCATISPADFWAEGEGIVQSLDDRRQELSLGVLKQAHTRILFILTRCTRLIQFRKESGYEDDHILGFHQLSDLGIYPEKMRQLEQLNFGDPLTVKEEIEQQLNLVGKDQASHIVKQDLGRSFSNSAGNVELDSALSVDSSTSVRMASWKKLPSAAEKNRKDSDSTGTPSRDKLELLHENEAKTGSNNQLDTPSNHVAHLEAPPKEQKLSWGIWGYHQNATFENLMICRICEVEIPTIHVEEHSRICTIADRCDLKGLTVNERLDRVATALEKILESWTPKSTPRSSDTSCGNFDTIKVSTSSMQEEVFVLSSKGINSSCQNSEDLLDSLPVTGNSSFMESQDIFPDSSYNRQFIFTPDHSTKSTSAGTLTPRSPLLTPRSSQIELLLHGRKAISELENYQQIYKLLDIVRSIANVNNSGYGALESMLDRLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVHFCGQIEDDKLESSHGMVDEESSVEDDTVRSLRASPVNKCSKDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDIYSLLRNLGCLDEDMARIYIAEIVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKIGLINSTDDFSGPSVSGPDSLGDNGPASLSKREHRQKQSVVGTPDYLAPEILLGIGHGVTADWWSVGVILFEMLVGIPPFNAENPQQIFDNIINRDIPWPKVPDEMSYEAHDLIDKLLTENAVQRLGATGAREVKEHPFFKDINWETLARQKAMFIPSAEPQDTSYFMSRYIWNPEDEDFNGGSDFDDHDLTDTCSSSSFSNLQDEDADECGSLTDFCTSALAVKYSFSNFSFKNLSQLASINYDLVVKSSQNSPDVSKPSVP 1172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 20083134 20095666 - MELO3C005408.2.1 Cme09g01488 338348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01488 1172 ProSitePatterns Serine/Threonine protein kinases active-site signature. 882 894 IPR008271 GO:0004672|GO:0006468
Cme09g01488 1172 Gene3D Transferase(Phosphotransferase) domain 1 847 1067 - -
Cme09g01488 1172 Pfam Protein kinase domain 763 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g01488 1172 SUPERFAMILY Protein kinase-like (PK-like) 760 1080 IPR011009 -
Cme09g01488 1172 MobiDBLite consensus disorder prediction 398 422 - -
Cme09g01488 1172 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 1172 - -
Cme09g01488 1172 MobiDBLite consensus disorder prediction 1 58 - -
Cme09g01488 1172 CDD STKc_MAST_like 769 1054 - -
Cme09g01488 1172 SMART serkin_6 763 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g01488 1172 ProSiteProfiles AGC-kinase C-terminal domain profile. 1050 1152 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cme09g01488 1172 MobiDBLite consensus disorder prediction 22 53 - -
Cme09g01488 1172 ProSiteProfiles Protein kinase domain profile. 763 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g01488 1172 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 13 1172 - -
Cme09g01488 1172 Gene3D Phosphorylase Kinase; domain 1 761 1076 - -
Cme09g01488 1172 MobiDBLite consensus disorder prediction 403 422 - -
Cme09g01488 1172 MobiDBLite consensus disorder prediction 80 116 - -
Cme09g01488 1172 MobiDBLite consensus disorder prediction 920 949 - -
Cme09g01488 1172 MobiDBLite consensus disorder prediction 79 116 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01924 Cme-Chr2:25629556 Cme09g01488 Cme-Chr9:20083134 6.88E-70 dispersed
Cme07g00204 Cme-Chr7:1355858 Cme09g01488 Cme-Chr9:20083134 1.63E-78 dispersed
Cme09g01488 Cme-Chr9:20083134 Cme12g02054 Cme-Chr12:26044146 0 dispersed
Cme09g01488 Cme-Chr9:20083134 Cme02g00269 Cme-Chr2:2258759 5.71E-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65163 PF00069 Pkinase 4.80E-64 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01488 - - csv:101210442 2234.14