Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01523 ATGTTCTTCTGCAAAATGGCCCCTACTTCCCTCGCTTTCCGCTGCCGACAGTCCATCACCCCAACTGCAATCCGATCCTACGTCGCCGAGTTCATCTCCACCTTCTTCTACGTCTTCTCTGTCGTTGGAGCATCCATGGCCTCCCAGAAGTATATGCCAGGCATTACTACGACAGACCTATCGAGTCTTCTGGTGGCCGCTATTGCCAATGCCTTTGCTTTGGCTTCAGCCGTATACATCGCCGCCAACATTTCCGGTGGACACGTCAACCCGGCAGTGACGTTCGGAATGGCCATTGGTGGCCATGTCAGCGTTCCCACTGCTCTCTTTTACTGGTTTGCTCAAATGCTTGCCTCTGTCATGGCCTGCATTATTCTTAGAGCCACCATTGTTGGACAGCGCGTTCCAAGCTATGCCATTGCCGATGAGATGACGGGGTTCGGAGCGTCGGTGGTGGAAGGTGTATTGACATTTGCACTAGTATACACCGTTTTTGCCGCCAGTGATCGGAGACGAGGTCCATGCAATGCGATTGGCGCGGTGATGATTGGGCTGATTGCTGGAGCCAATGTGCTGGCTGCGGGGCCATTTTCGGGTGGATCGGTGAACCCGGCGTGTGCATTTGGATCGGCGATTGTGGCGGGGAGTTTCAAGAACCAGGCAGTGTATTGGGTTGGGCCATTGATTGGGGCGGCTTTGGCTGGAATTGTTCATGATAATGTGGTTTTTCCGGCTGAAAATGTAGATTCGTTCAGAGGGGTTCCTGAGGCTGTTATCGCTTGA 783 53.38 MFFCKMAPTSLAFRCRQSITPTAIRSYVAEFISTFFYVFSVVGASMASQKYMPGITTTDLSSLLVAAIANAFALASAVYIAANISGGHVNPAVTFGMAIGGHVSVPTALFYWFAQMLASVMACIILRATIVGQRVPSYAIADEMTGFGASVVEGVLTFALVYTVFAASDRRRGPCNAIGAVMIGLIAGANVLAAGPFSGGSVNPACAFGSAIVAGSFKNQAVYWVGPLIGAALAGIVHDNVVFPAENVDSFRGVPEAVIA 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 20356405 20357738 - MELO3C005441.2.1 Cme09g01523 338383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01523 260 ProSitePatterns MIP family signature. 88 96 IPR022357 -
Cme09g01523 260 PRINTS Major intrinsic protein family signature 25 44 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01523 260 PRINTS Major intrinsic protein family signature 70 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01523 260 PRINTS Major intrinsic protein family signature 107 126 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01523 260 PRINTS Major intrinsic protein family signature 152 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01523 260 PRINTS Major intrinsic protein family signature 184 206 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01523 260 PRINTS Major intrinsic protein family signature 221 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01523 260 PANTHER AQUAPORIN TIP5-1-RELATED 10 257 - -
Cme09g01523 260 PANTHER AQUAPORIN-8 10 257 IPR034294 -
Cme09g01523 260 Pfam Major intrinsic protein 21 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01523 260 SUPERFAMILY Aquaporin-like 18 246 IPR023271 -
Cme09g01523 260 Gene3D Glycerol uptake facilitator protein. 11 251 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g01268 Cme-Chr8:9177803 Cme09g01523 Cme-Chr9:20356405 1.94E-51 dispersed
Cme09g01523 Cme-Chr9:20356405 Cme09g01609 Cme-Chr9:20879919 1.51E-62 dispersed
Cme09g01523 Cme-Chr9:20356405 Cme04g02488 Cme-Chr4:31313855 1.49E-58 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01523 K09873 - csv:101214078 486.108