Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme09g01539 | ATGGCTTTCTCCAAAGCACTGCCCTATATTCTCCTCGTCACCATGCTGTTCACTGTCGGGCCAACCATGGCGCAGTTGAGCCCGACGTTCTACGACACCACATGCCCCAACCTATCCTCCATTGTAGAAGATGTAGTGAGACAAGCACTCCAAACCGATGCCCGAGCAGGTGCCAAACTCATTCGCTTTCATTTCCATGATTGTTTCGTCAATGGATGTGATGGGTCGGTTCTACTTGAAGACTCAGTCGCAGATGGTATAGACAGTGAACAAAACGCACCCGGAAACCAAGGAATACAAGGCCAAAATATCGTCGCCGACATCAAAACTGCAGTTGAAAATGCATGTCCAAGCGTTGTCTCATGTGCTGATATCTTAGCTATTGCATCTAATTCAGCCGTCGTCTTGGCAGGAGGAAGGGGTTGGGAGGTTCAACTAGGAAGAAGAGATAGCAGAATAGCAAATAGGTCAGGAGCTGTGAGTAATCTTCCAAGTCCTTTTGAACCTCTTGCAAATCTTACTGTCAAGTTTGCCAACGTTGGTCTTAATTCTACTGATCTTGTCTCTTTATCTGGGGCGCACACGTTTGGTCAATCAAGGTGCCGATTCTTTCAAGGGCGATTGAGCAACTTTAGCGGAACGGGGATGCCTGATCCAAGTCTAGACCCGACCTACAGAGACATCCTTCTAGAGGCATGTCCTCAAGGCGGAGACGACAACCGAGTGAATCTAGACCCGACAACTCCCGATGAATTCGACAACAACTATTTCACCAATCTTCAAGGCAACCGTGGGCTTCTTACAAGTGACCAAGTACTGTTCTCCCCTCCTGGTGCCGCCACCACCGTTGACGTGGATCGCTTTGCAGCAAGCCAAGAAGTATTCTTTGATGCTTTTGGAGCCTCCATGATAAAGATGGGGAATATTATGAGCCCATCGACTACAACTGATGGGTCGGAGATACGTTTAACTTGTTCTAGGGTTAATCCTTTGCCTACTCTTGCTGATATGTAA | 1014 | 47.73 | MAFSKALPYILLVTMLFTVGPTMAQLSPTFYDTTCPNLSSIVEDVVRQALQTDARAGAKLIRFHFHDCFVNGCDGSVLLEDSVADGIDSEQNAPGNQGIQGQNIVADIKTAVENACPSVVSCADILAIASNSAVVLAGGRGWEVQLGRRDSRIANRSGAVSNLPSPFEPLANLTVKFANVGLNSTDLVSLSGAHTFGQSRCRFFQGRLSNFSGTGMPDPSLDPTYRDILLEACPQGGDDNRVNLDPTTPDEFDNNYFTNLQGNRGLLTSDQVLFSPPGAATTVDVDRFAASQEVFFDAFGASMIKMGNIMSPSTTTDGSEIRLTCSRVNPLPTLADM | 337 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 20471391 | 20473519 | - | MELO3C005456.2.1 | Cme09g01539 | 338399 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme09g01539 | 337 | PANTHER | PEROXIDASE 58 | 17 | 329 | - | - | |
Cme09g01539 | 337 | PRINTS | Plant peroxidase signature | 35 | 54 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | PRINTS | Plant peroxidase signature | 59 | 79 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | PRINTS | Plant peroxidase signature | 100 | 113 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | PRINTS | Plant peroxidase signature | 119 | 129 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | PRINTS | Plant peroxidase signature | 138 | 153 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | PRINTS | Plant peroxidase signature | 185 | 197 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | PRINTS | Plant peroxidase signature | 243 | 258 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | PRINTS | Plant peroxidase signature | 259 | 276 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | PRINTS | Plant peroxidase signature | 301 | 314 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | Pfam | Peroxidase | 42 | 283 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | PRINTS | Haem peroxidase superfamily signature | 57 | 71 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | PRINTS | Haem peroxidase superfamily signature | 120 | 137 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | PRINTS | Haem peroxidase superfamily signature | 138 | 150 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | PRINTS | Haem peroxidase superfamily signature | 186 | 201 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | PRINTS | Haem peroxidase superfamily signature | 245 | 260 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | CDD | secretory_peroxidase | 25 | 328 | IPR033905 | GO:0004601|GO:0042744 | |
Cme09g01539 | 337 | ProSiteProfiles | Plant heme peroxidase family profile. | 25 | 329 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 186 | 196 | IPR019793 | - | |
Cme09g01539 | 337 | Gene3D | Peroxidase, domain 2 | 164 | 306 | - | - | |
Cme09g01539 | 337 | SUPERFAMILY | Heme-dependent peroxidases | 25 | 330 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | PANTHER | PEROXIDASE 72-RELATED | 17 | 329 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme09g01539 | 337 | Gene3D | - | 30 | 329 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme05g00098 | Cme-Chr5:621341 | Cme09g01539 | Cme-Chr9:20471391 | 1.64E-140 | dispersed | |
Cme05g00099 | Cme-Chr5:628079 | Cme09g01539 | Cme-Chr9:20471391 | 3.92E-139 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme09g01539 | K00430 | - | csv:101215530 | 629.017 |