Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01539 ATGGCTTTCTCCAAAGCACTGCCCTATATTCTCCTCGTCACCATGCTGTTCACTGTCGGGCCAACCATGGCGCAGTTGAGCCCGACGTTCTACGACACCACATGCCCCAACCTATCCTCCATTGTAGAAGATGTAGTGAGACAAGCACTCCAAACCGATGCCCGAGCAGGTGCCAAACTCATTCGCTTTCATTTCCATGATTGTTTCGTCAATGGATGTGATGGGTCGGTTCTACTTGAAGACTCAGTCGCAGATGGTATAGACAGTGAACAAAACGCACCCGGAAACCAAGGAATACAAGGCCAAAATATCGTCGCCGACATCAAAACTGCAGTTGAAAATGCATGTCCAAGCGTTGTCTCATGTGCTGATATCTTAGCTATTGCATCTAATTCAGCCGTCGTCTTGGCAGGAGGAAGGGGTTGGGAGGTTCAACTAGGAAGAAGAGATAGCAGAATAGCAAATAGGTCAGGAGCTGTGAGTAATCTTCCAAGTCCTTTTGAACCTCTTGCAAATCTTACTGTCAAGTTTGCCAACGTTGGTCTTAATTCTACTGATCTTGTCTCTTTATCTGGGGCGCACACGTTTGGTCAATCAAGGTGCCGATTCTTTCAAGGGCGATTGAGCAACTTTAGCGGAACGGGGATGCCTGATCCAAGTCTAGACCCGACCTACAGAGACATCCTTCTAGAGGCATGTCCTCAAGGCGGAGACGACAACCGAGTGAATCTAGACCCGACAACTCCCGATGAATTCGACAACAACTATTTCACCAATCTTCAAGGCAACCGTGGGCTTCTTACAAGTGACCAAGTACTGTTCTCCCCTCCTGGTGCCGCCACCACCGTTGACGTGGATCGCTTTGCAGCAAGCCAAGAAGTATTCTTTGATGCTTTTGGAGCCTCCATGATAAAGATGGGGAATATTATGAGCCCATCGACTACAACTGATGGGTCGGAGATACGTTTAACTTGTTCTAGGGTTAATCCTTTGCCTACTCTTGCTGATATGTAA 1014 47.73 MAFSKALPYILLVTMLFTVGPTMAQLSPTFYDTTCPNLSSIVEDVVRQALQTDARAGAKLIRFHFHDCFVNGCDGSVLLEDSVADGIDSEQNAPGNQGIQGQNIVADIKTAVENACPSVVSCADILAIASNSAVVLAGGRGWEVQLGRRDSRIANRSGAVSNLPSPFEPLANLTVKFANVGLNSTDLVSLSGAHTFGQSRCRFFQGRLSNFSGTGMPDPSLDPTYRDILLEACPQGGDDNRVNLDPTTPDEFDNNYFTNLQGNRGLLTSDQVLFSPPGAATTVDVDRFAASQEVFFDAFGASMIKMGNIMSPSTTTDGSEIRLTCSRVNPLPTLADM 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 20471391 20473519 - MELO3C005456.2.1 Cme09g01539 338399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01539 337 PANTHER PEROXIDASE 58 17 329 - -
Cme09g01539 337 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 Pfam Peroxidase 42 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 CDD secretory_peroxidase 25 328 IPR033905 GO:0004601|GO:0042744
Cme09g01539 337 ProSiteProfiles Plant heme peroxidase family profile. 25 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cme09g01539 337 Gene3D Peroxidase, domain 2 164 306 - -
Cme09g01539 337 SUPERFAMILY Heme-dependent peroxidases 25 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 PANTHER PEROXIDASE 72-RELATED 17 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme09g01539 337 Gene3D - 30 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00098 Cme-Chr5:621341 Cme09g01539 Cme-Chr9:20471391 1.64E-140 dispersed
Cme05g00099 Cme-Chr5:628079 Cme09g01539 Cme-Chr9:20471391 3.92E-139 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01539 K00430 - csv:101215530 629.017