Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01553 ATGAAGATGAAAATGAAGAATGTAAACAACCCTAATAGTACATTTGAAGATTCCTTCTCTCATGATGATCAACTAATTACTCACAATATTCATTCGACCGTCTTCCCGTATTTTGCTCGGTGGCAAACTACGTACGGAAAAGTATTTACATACTGGTTGGGGACAGAGCCATTCTTGTATATAGCAGACCCAGAATTTGTGAAGATATTATCAAAAGAAGTAAAAGCAAAGAATTGGGGAAAGCCATCAGTGTTCAAAAATGACAGGAAATCAATGTTTGGAAATGGTTTGGTAATGGCTGAAGGAGATGAATGGGTTCGCCAAAGACATATCATCACCCCTGCATTTAATCCTTCCAACTTGAAGGCAATGGCAAGCTTAATGGTGGAGTCCGCCACCAAGATGGTGGAGAGATGGGCTAACCTCGTCATCTCCGGCAACCCTCAAATCGAAGTCGAGCAAGAGATAACTTCCACCGCCGGCGAAATCATTGCCAAAACCAGCTTTGGAATCCATCATGAAAGCGGCCGACAAGTCTTCAACAAACTCCGCCAACTCCAAATCACTCTATTCAAAACTAACCGCCTTGTCGGCGTCCCCTTCGTCGGGCTTTTAAACGCCGCCAAGGCACGGGAGGCCAAACTTCTCGGGGAGGAAATTGACGAGTTGTTTCGGTCGGTGATTACGGAGAGGAGAGAAGATGCGGTGGCGGAGAGGACGACGACGGAGCAGCAGAATGATCTTTTGAGTTTGCTTTTGAAAGAGAGTAGTGGTGGCGGAGGAGGAGAAGAAGGGAGGAGGCTGAGCACGGCGGAGCTGATTGATGAATGTAAAACGTTTTTTTTCGGTGGACATGAAACGACGGCGTTGGCTTTGACGTGGACTTTGATGCTATTGGCTGTTCATTCTGAATGGCAAACAATATTGAGAGAGGAAATTAAAGAAGTTTTTGGTCATAATTTACAAACTCACTTTGATTTCACTAACCTTTCTTCACTCAAAAAGATGGGATGGGTGATGAGTGAGGTCCTACGTTTGTATCCATCGGCTCCAAATGTACAAAGACAAGCAAGGAAAGACATTATAATTAATGGACTCACAATCCCTAATGGCACCAACATGTGGATTGATGTTGTATCCATGCACCATGACCAAGCTCTTTGGGGTCACCAAGTCAATGAATTTCACCCCGAGAGGTTCCGAAACGACACTGTTTCGGGAGGTTGCACACACAAGATGGGTTATTTGCCCTTTGGCTTTGGAGGAAGAATGTGTGTTGGTAGGCATTTGACCTTTATGGAGTATAAGATTGTTTTGACTCTTATTTTGTCTAGGTTTTCCTTCTCTTTGTCGCCAGATTATCGACATTCGCCTTCTATAATGCTCTCGCTACGACCTGCCCATGGTCTGCCTCTCGTTTTCCGGCTACTCGAAGATTAA 1440 44.58 MKMKMKNVNNPNSTFEDSFSHDDQLITHNIHSTVFPYFARWQTTYGKVFTYWLGTEPFLYIADPEFVKILSKEVKAKNWGKPSVFKNDRKSMFGNGLVMAEGDEWVRQRHIITPAFNPSNLKAMASLMVESATKMVERWANLVISGNPQIEVEQEITSTAGEIIAKTSFGIHHESGRQVFNKLRQLQITLFKTNRLVGVPFVGLLNAAKAREAKLLGEEIDELFRSVITERREDAVAERTTTEQQNDLLSLLLKESSGGGGGEEGRRLSTAELIDECKTFFFGGHETTALALTWTLMLLAVHSEWQTILREEIKEVFGHNLQTHFDFTNLSSLKKMGWVMSEVLRLYPSAPNVQRQARKDIIINGLTIPNGTNMWIDVVSMHHDQALWGHQVNEFHPERFRNDTVSGGCTHKMGYLPFGFGGRMCVGRHLTFMEYKIVLTLILSRFSFSLSPDYRHSPSIMLSLRPAHGLPLVFRLLED 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 20537686 20540962 + MELO3C005468.2.1 Cme09g01553 338413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01553 479 Pfam Cytochrome P450 33 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01553 479 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01553 479 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01553 479 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01553 479 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01553 479 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 473 - -
Cme09g01553 479 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 18 473 - -
Cme09g01553 479 SUPERFAMILY Cytochrome P450 30 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01553 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Cme09g01553 479 Gene3D Cytochrome P450 22 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01553 479 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01553 479 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01553 479 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01553 479 PRINTS E-class P450 group I signature 42 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01553 479 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme06g01006 Cme09g01553 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01006 Cme-Chr6:7225797 Cme09g01553 Cme-Chr9:20537686 0 dispersed
Cme09g01553 Cme-Chr9:20537686 Cme06g01675 Cme-Chr6:18404540 9.05E-104 dispersed
Cme09g01553 Cme-Chr9:20537686 Cme05g01942 Cme-Chr5:28013128 8.15E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01553 - - cmo:103482547 937.562