Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01613 ATGGAAGATGCGGCAGTGATCGGAGGATTGATGGTGGTGCAGTTGATATACGCCGGAAATTCGGTATTGTTGAGTTATTTGATGTCGTTAGGGCTAAATCCGCTCACCGTCGTTGTTTGTTTCGCGGCTGCTACTTCTCTCTTTCTCTCTCCTCTCGCCTTTTATTTTGAAAGGAGGAAATGGCCAAAGAAATTGAGTTTTAAGTTGATGCTTCAACTTGTTCTCATCTCCTTTGGAGGAGTAACTTTGTTCCAAAGTTTGCTATTAGAAGGTATAAAGCTGACTTCTCCGGCCATGGCTACTGCCATGCCCAACCTTGCCCCTGGCCTCATCTTTATCATTGCCTGGTGTTTTAGATTAGAGAGAGTGGAAGTTAGTTGTGTATACAGCAAAGTAAAGATATTAGGGACATTGCTATGTGTAGTAGGTGCAATCACAATGAGCATAATACAAAGCAGCATTATAATACCATCAAAACACCAACAACTAACGACAACTACTTCGTCTCCACCACCACTACTTACCACCATTGTACTCTTCAATAAGGAAAAAATTGTTGGTTGTTTCTACTTAATGCTGGCTGTCTTCATATTATCAAGCAACGTTGTCTTGCAGGCAACGGCACTAGGTGAATTACCAGCACCAATGTCATTGAGTGCAATAACATCCTTTATTGGAGTGTTCACCACTGCATCTATAATGCTACTTCAAAATCACAACTTACTAAAAGATTGGTCCGTTCTCAACATTAAGGATTTATTCTCCTATTCTCTTTTGGGAGGAATAATGAGTGGGATAAGCTTGAGCTTCAATGGATGGGCAATGAAGAAGAGAGGACCAGTTTTGGTATCAATTTTCAGTCCAATTGGAACTGTTTTCTCTGTCATTCTCTCGCTCTTCACCTTAGGAGACACTATTTCTGTTGAAAGCTTGGGTGGTATGTTGGTGATGTTTTGTGGTCTCTACTTTGTGCTATGGGCAATAAGAAATGAAGGTTATTGTGATGAAAGTGGCTATGAAACTCATGACGACTTTGATCTTCAAAAACCTTTGCTCTCTTAG 1062 40.68 MEDAAVIGGLMVVQLIYAGNSVLLSYLMSLGLNPLTVVVCFAAATSLFLSPLAFYFERRKWPKKLSFKLMLQLVLISFGGVTLFQSLLLEGIKLTSPAMATAMPNLAPGLIFIIAWCFRLERVEVSCVYSKVKILGTLLCVVGAITMSIIQSSIIIPSKHQQLTTTTSSPPPLLTTIVLFNKEKIVGCFYLMLAVFILSSNVVLQATALGELPAPMSLSAITSFIGVFTTASIMLLQNHNLLKDWSVLNIKDLFSYSLLGGIMSGISLSFNGWAMKKRGPVLVSIFSPIGTVFSVILSLFTLGDTISVESLGGMLVMFCGLYFVLWAIRNEGYCDESGYETHDDFDLQKPLLS 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 20909807 20912897 + MELO3C005529.2.1 Cme09g01613 338473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01613 353 PANTHER OS11G0588100 PROTEIN 7 353 - -
Cme09g01613 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 148 - -
Cme09g01613 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 327 - -
Cme09g01613 353 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Cme09g01613 353 Pfam EamA-like transporter family 11 148 IPR000620 GO:0016020|GO:0016021
Cme09g01613 353 PANTHER WAT1-RELATED PROTEIN 7 353 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g01613 Cme-Chr9:20909807 Cme10g00878 Cme-Chr10:6168596 2.00E-41 dispersed
Cme06g02562 Cme-Chr6:32625362 Cme09g01613 Cme-Chr9:20909807 3.33E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01613 - - csv:101204100 605.905