Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01616 ATGGCATTCTTATTCGTCCACTCATTTTTCTTCTTCACTTTCTTCCTCCTCTGCTTTTTTTCCGCCGCAACCAATCACCTCCACCACTGGGTCGGACCCACCGGCCACCGCCTCATAAAAGTTAACGTTAACGGTGGCTCCGACGTGTTTCTGTCCGTGCAAGCCGCCGTGGATTCAATTCCCGATTATAATACCGTTAACACCATCATCCGAATCAGCCCTGGATATTATGTGGAGAAAGTTGTGGTGCCGGCGACGAAGCCATACATAACATTTGAAGGAGGGGGAAAGGAGACGACGGTGATTGAGTGGCACGACAGGGCAGGTGACCGTGGTCCGAGTGGGCAGCAGCTTCGTACTTATAGAACTGCTTCCGTTACCGTTTTTGCTAATTACTTCTCTGCCCGAAACATCAGCTTCAAGAATACGGCACCGGCGCCATTGCCCGGAATGCAAGGGTGGCAGGCGGCGGCTTTCCGAATCTCCGGCGACAAAGCGTACTTTTCGGGTTGCGGATTCTACGGGGCACAAGATACCCTTTGCGACGATGCCGGCCGCCATTACTTCAAAGAATGTTACATTGAAGGCTCCATAGACTTCATCTTTGGAAATGGCCGTTCCATGTATAAGGACTGCGAATTGCACTCCATAGCCACCCGGTTCGGTTCCATAGCAGCTCAAGATAGAAACTCTCCACACGAAAAGACCGGGTTTGCTTTCCTTCGATGTAAGGTAACAGGTTCGGGACCCATCTACGTGGGCCGTGCCATGGGGCAGTACTCGAGAATCGTCTACGCGTATACTTACTTTGATGATGTGGTAGCACACGGTGGATGGGATGATTGGGACCATGTCAGCAACAAAAACAAGACTGTATTTTTTGGAGTATACAAGTGCTGGGGGCCAGGGGCGAGCAAAGTAAAAGGAGTATCATGGGCCAAGGAGTTGGAGTATAAAGAGGCACATCCATTTCTAGCCAAGAGCTTCGTCAATGGCAGACACTGGATTGCTCCCTCTGATGCTTAG 1026 50.78 MAFLFVHSFFFFTFFLLCFFSAATNHLHHWVGPTGHRLIKVNVNGGSDVFLSVQAAVDSIPDYNTVNTIIRISPGYYVEKVVVPATKPYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPHEKTGFAFLRCKVTGSGPIYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWAKELEYKEAHPFLAKSFVNGRHWIAPSDA 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 20928399 20933937 - MELO3C005532.2.1 Cme09g01616 338476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01616 341 Pfam Pectinesterase 44 332 IPR000070 GO:0030599|GO:0042545
Cme09g01616 341 PANTHER PECTINESTERASE 68-RELATED 22 340 - -
Cme09g01616 341 ProSitePatterns Pectinesterase signature 2. 194 203 IPR033131 -
Cme09g01616 341 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 22 340 - -
Cme09g01616 341 SUPERFAMILY Pectin lyase-like 37 338 IPR011050 -
Cme09g01616 341 Gene3D - 36 340 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01692 Cme-Chr7:22479529 Cme09g01616 Cme-Chr9:20928399 3.16E-101 dispersed
Cme09g01616 Cme-Chr9:20928399 Cme11g00120 Cme-Chr11:1132774 4.75E-82 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01616 - - cmo:103483059 685.641