Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01657 ATGGAACTCACCTCCAATTTCCTTCAAACTTTCATTCATTCTCTCAATTTCTACAAAACCCACTTTCTGTTTACTCTCTTTGCCGGTTTTCTACTTCTTCTTTACGTCAAACTTTCGCAGCGGCGCATCCACCTGCCACCGGGTCCCACCGGCGTTCCTCTCCTAGGAAATCTGCCGTTTCTAGACCCTGAACTTCACTCTTACTTTACGGAACTGGGCAGAAAGTACGGTCCAATTGTAAGGCTCCGATTGGGTGGAAAGATTGGTATAATCGTCAACTCATCCTCCGTTGCACGTGAGGTGTTAAAGGATCACGATATCACCTTCGCCAATCGTGACGTTCCTCAAGCTGGTCGAGCCGCCACTTACGGCGGTTATGACATAAGTTGGGCCCCCTACGGACCCGAATGGCGGATGTTGAGAAAAGTTTGTACGGTCAAGATGCTTAGCAACGCCAGCTTGGACTCTGTATATGAGCTCCGCCGTAGAGAGGTTAGAAAAACGGTGGCTCATTTGTACAGGCGAGCTGGGTCGGCGGTGAACGTGGGAGAGCAGGGGTTTTTGACGATTTTCAACGTGGTTACGAGCATGTTGTGGGGTGGTTCAGTGGAAAACGATCAAAGCAGGGATGACATTGCGGCTGACTTTAGAGAGACGGTTTCGGACGTAACTAAGCTTCTTGGTCTGCCCAATGTCTCTGACTTTTTTCCGAGTTTAGCTCGTTTTGATCTTCAAGGAATTGAGAAGCAGATGGGTAAGCATGTCCAGAAACTAGACGCCATCTTTGAAAAGATGATTGATGAACGACTGAGAATGAAAGACGTTAATGAGAGTGCGAAGAAAGATGATTTCTTGCAGTTTTTATTAAAAGTCAAAGATGAAGGCGATTCCAAAACTCCTCTCACCATGGTTCAACTTAAAGGTTTGCTAATGGATATGGTGATTGGTGGAACAGACACGTCCTCGAACACAATTGAATTCGCAATGGCTGAAATAATGAAGAACCCAAAAATCGTAGAAAAAGCAAAGGAAGAACTCTGTGCTGTGGTTGGAGAACAAAGTATGGTAGAAGAATCCCATATACAGAGCTTGCCATATCTTAAAGCCGTAATGAAAGAAGCCTTGCGTCTCCATCCAACTCTGCCGCTGCTAGTCCCACACTGTCCCAGTGAGACCACCGTCATCTCCAATTACACAATCCCAAAGGGCTCCCGAATGTTCGTCAACATCTGGGCCATTCAACGAGACCCTAATGAATGGGAAAATCCATCGGTGTTCGACCCAGAGAGGTTCTTGAATGGTAAATTCGATTTCAGTGGGAGTGATTTTCGTTATTTACCATTTGGGTCTGGCAGAAGAAACTGTGCAGGGATTGCTATGGCGGAAAGAACTGTAATGTATTTGCTTGCTACGCTTTTGCATTCATTCGATTGGAAACTGGAAGAAGGTGAGAAGATTGAAATTGAGGAAAAATTTGGGATTGTTTTAAAGATGAAGAAGCCTCTTGTTCTCATCCCAACGCCTAGACTATTAGACCCTACTCTGTATCAGTAA 1554 45.37 MELTSNFLQTFIHSLNFYKTHFLFTLFAGFLLLLYVKLSQRRIHLPPGPTGVPLLGNLPFLDPELHSYFTELGRKYGPIVRLRLGGKIGIIVNSSSVAREVLKDHDITFANRDVPQAGRAATYGGYDISWAPYGPEWRMLRKVCTVKMLSNASLDSVYELRRREVRKTVAHLYRRAGSAVNVGEQGFLTIFNVVTSMLWGGSVENDQSRDDIAADFRETVSDVTKLLGLPNVSDFFPSLARFDLQGIEKQMGKHVQKLDAIFEKMIDERLRMKDVNESAKKDDFLQFLLKVKDEGDSKTPLTMVQLKGLLMDMVIGGTDTSSNTIEFAMAEIMKNPKIVEKAKEELCAVVGEQSMVEESHIQSLPYLKAVMKEALRLHPTLPLLVPHCPSETTVISNYTIPKGSRMFVNIWAIQRDPNEWENPSVFDPERFLNGKFDFSGSDFRYLPFGSGRRNCAGIAMAERTVMYLLATLLHSFDWKLEEGEKIEIEEKFGIVLKMKKPLVLIPTPRLLDPTLYQ 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21300678 21302794 - MELO3C005570.2.1 Cme09g01657 338517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01657 517 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 SUPERFAMILY Cytochrome P450 46 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 PANTHER OS08G0547900 PROTEIN 19 517 - -
Cme09g01657 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Cme09g01657 517 Gene3D Cytochrome P450 35 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01657 517 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 19 517 - -
Cme09g01657 517 Pfam Cytochrome P450 46 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g01657 Cme-Chr9:21300678 Cme09g01660 Cme-Chr9:21315468 1.06E-145 dispersed
Cme09g01691 Cme-Chr9:21568995 Cme09g01657 Cme-Chr9:21300678 2.90E-106 dispersed
Cme09g01657 Cme-Chr9:21300678 Cme09g01658 Cme-Chr9:21307075 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01657 - - csv:101213781 904.82