Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01658 ATGGAAGATCCCACCTCCAATTTTTTCTCCATTGACCAATCTCACTTCTTCTTCACCTTCCTCGCCGCTCTTCTAATCTTCCTCTACCTAAGGCTCACCCGGCTGCGCGTCCCGCTCCCACCGGGTCCCCGCGGGGTTCCACTCCTCGGGAACCTCCCTTTCCTCGACCCCGAACTTCACACCTACTTCGCCCAACTAAGCCAAAAATACGGCCCGATAGTCAAGCTCCAGCTCGGTAGAAAAATCGGTATAATCATAAATTCACCGTCCGTGGTACGTGAAGTGTTGAAAGACCATGATGTCACGTTTGCCAATCGTGATGTTCCCCATGCCGGGAGAGCCGCGTCATACGGTGGTTCCGACATAGTTTGGACTCCGTATGGACCTCAGTGGCGAATGTTGAGGAAAGTTTGTGTGCTCAAGATGTTAAGCAACGCGACTTTGGATAGTGTCTACGAGCTCCGCCGTAGAGAGGTGAGAAACACGGTGGCTCACTTGTATGCGCGAGCTGGGACGAGGGTGAACGTAGGAGAGCAGGGGTTTTTGACGGTATTCAACGTGGTTACGAGCATGTTGTGGGGTGGATCAGTGGAAGGGGAGCAAAGGGATGGTCTTGCAGCGGAGTTTAGAGAGACGGTTTCGGAGATGACGGAGCTGTTAGGGCTGCCTAATGTTTCGGACTTTTTCCCGAGCTTGGCTCGATTTGATATCCAAGGCATTGAGAAGAAGATGCGTGAACTTGCGCCGAGATTTGATAGCATTTTTGAGAAAATGATAGATCAACGATTGAAAATTGATGGCAAAGACGAGGGCGAGAGTGTGAAGAAGAATGATTTCTTGCAGTTCTTACTTCAAGTGAAGGATGATGGAGAATCCAAGACTCCTCTCACCATGACCCACCTTAAAGCTTTGCTCATGGACATGGTGATTGGCGGGACGGACACATCGTCAAATACAGTAGAGTTTGCTATGGCAGAAATGTTAAAGAGCCCGAAAACTCTAAAGAAAGCACAACAAGAACTCGTAGCCGTGGTCGGAGAAGACAACATCGTGGAAGAGTCCCATATTCATAGTTTACCATATCTCAAAGCTGTAATGAAAGAAACATTACGTCTACACCCAATTCTACCTCTGCTCGTGCCGCACTGCCCAAGCGAGACCGCCATCGTCTCCAATTACACAATCCCAAAGGGATCTCGAGTATTCATCAACGTATGGGCAATTCAGCGAGACCCCAAGAACTGGGATAATCCATTGGAGTTCGACCCAGAGAGATTCTTGAATGGTAAATATGATTTCAGTGGGAACGATTTTCGTTACTTCCCGTTCGGGTCCGGGAGAAGAAACTGTGCAGGGATAGGGATGGCGGAAAGAATGGTAATGTATTTGCTTGCTACACTTTTGCATTCATTTGATTGGAAATTGGGAGATGGTGATGAGAAGATTGAAGTTGAAGAGAAATTTGGGATTGTTTTGAAAATGAAGACTCCTCTTGTTAGTTGTACTGTATAA 1512 47.75 MEDPTSNFFSIDQSHFFFTFLAALLIFLYLRLTRLRVPLPPGPRGVPLLGNLPFLDPELHTYFAQLSQKYGPIVKLQLGRKIGIIINSPSVVREVLKDHDVTFANRDVPHAGRAASYGGSDIVWTPYGPQWRMLRKVCVLKMLSNATLDSVYELRRREVRNTVAHLYARAGTRVNVGEQGFLTVFNVVTSMLWGGSVEGEQRDGLAAEFRETVSEMTELLGLPNVSDFFPSLARFDIQGIEKKMRELAPRFDSIFEKMIDQRLKIDGKDEGESVKKNDFLQFLLQVKDDGESKTPLTMTHLKALLMDMVIGGTDTSSNTVEFAMAEMLKSPKTLKKAQQELVAVVGEDNIVEESHIHSLPYLKAVMKETLRLHPILPLLVPHCPSETAIVSNYTIPKGSRVFINVWAIQRDPKNWDNPLEFDPERFLNGKYDFSGNDFRYFPFGSGRRNCAGIGMAERMVMYLLATLLHSFDWKLGDGDEKIEVEEKFGIVLKMKTPLVSCTV 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21307075 21310763 + MELO3C005571.2.1 Cme09g01658 338518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01658 503 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 SUPERFAMILY Cytochrome P450 40 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 Pfam Cytochrome P450 40 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 12 500 - -
Cme09g01658 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Cme09g01658 503 Gene3D Cytochrome P450 31 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01658 503 PANTHER OS08G0547900 PROTEIN 12 500 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g01658 Cme-Chr9:21307075 Cme09g01661 Cme-Chr9:21321000 4.27E-150 dispersed
Cme09g01693 Cme-Chr9:21585213 Cme09g01658 Cme-Chr9:21307075 4.91E-115 dispersed
Cme09g01657 Cme-Chr9:21300678 Cme09g01658 Cme-Chr9:21307075 0 tandem
Cme09g01658 Cme-Chr9:21307075 Cme09g01659 Cme-Chr9:21311988 1.28E-14 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01658 - - csv:101213303 906.746