Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01689 ATGGAATATTTCTTCACCTTCCCTTACTTCATCTTCCTTATCTTCACTTTCATAACCCTCCGATGTCTAATTCCGGGAAGACGAAACCCCAAGCTTCCCCCCGGACCAACACCGCTTCCCATCATTGGAAACCTCTTTGTTCTTAGACACAAACCCCACCAAGCTCTTACCAAGCTCGCCAAGTCTTACGGTCCAATTATGTCGTTAAAGCTTGGCCAAGTCACCACCGTTGTATTTTCGTCTGCAGAAACAATCCAACAAGTTCTTCAAACACATGACAATGTCTTGTCATATAGATTCATTCCCGATGCGGCAACAGTTTACGACCATGCCGAACTAGGACTTCCATGGATTCCCATCTCTCCTAATTACAAAAACCATAGAAAAATCTTCAACAACTATCTTTTATCTCCCAAGGCTCTCGACGCCAGTCGAGATCTTCGCCGCTTGAGGATAGACAAGCTTCTTGATAACATCCGACGATGCGCAGTGAACGGCGAGGTGGTGGACATAGGAAGAACTTTATTTTCAATGGCGCTTAATTTGATATCGTATACAATTTGGTCTGTGGATTTGGTGGATGAGGATTCAGAAATGACCAAAGAATTCAAGACAACTCTGAGAGGAAGCTTGGAAGAAATAGGAAGACCTAATATTAGTGACTTTTTTCCTATGTTGAAGAAGATGGATATTCAAGGTGTAAGGAGACGCACCACCGTTCATTTTGGAAAGATATTAAGTTTGATTGATGAGATGATTGATAAACGGTTGAAGATGCAGGAGTCACCTGATTTCACACCTAAAAATGATTTGTTACATTATCTTCTCAACATGAAGGAGGACAACAGTGGGATTCCTCTTGATAGAAACCAAATCAAGCATTCAATATTCGTTTTATTTACAGGAAGTTCAGATACAACAGGATCAGTAGCACAATGGATAATGGCATATCTCTTAAAAAATCCAAAACTTATGTGTAAAGCCAAAGAAGAACTAATGGAAGTGATAGGTAAAGGCAATCGAATTGAAGAATCACACATGGAGAAGCTTCCATATCTACAAGCAATCATTAAAGAAGCCTTAAGAATGCAATCATCATTTCTAATTCCACGTAAAGCAGAATCCGAAGTAATAATTTCAGGTTTCACAATTCCAAAAGGGACTCAAATTCTTGTGAATTTATGGGCTTCATGTAGAGACCCAAATTTGTGGGAAAATCCAGACGAGTTCATACCAGAAAGGTTCTTGGAAAGTAAAGGAAAAAATTTTGAGTTTATTCCATTTGGTAATGGGAAGAGGACTTGTCCTGGTCAAGGAATGGCAATGAGGATGTTGCATTTGATTGTTGGTTCTTTGATTCATTTCTTTAATTGGAAGCTTGAAGATGGAGTCACGCCTGAGAATTTGAATATGGATGCAAAGTTTGGTCTTACTCTTGTCAAAGCTCAACCAGTACGAGCTATACCTCTTCTTATCTAG 1479 39.55 MEYFFTFPYFIFLIFTFITLRCLIPGRRNPKLPPGPTPLPIIGNLFVLRHKPHQALTKLAKSYGPIMSLKLGQVTTVVFSSAETIQQVLQTHDNVLSYRFIPDAATVYDHAELGLPWIPISPNYKNHRKIFNNYLLSPKALDASRDLRRLRIDKLLDNIRRCAVNGEVVDIGRTLFSMALNLISYTIWSVDLVDEDSEMTKEFKTTLRGSLEEIGRPNISDFFPMLKKMDIQGVRRRTTVHFGKILSLIDEMIDKRLKMQESPDFTPKNDLLHYLLNMKEDNSGIPLDRNQIKHSIFVLFTGSSDTTGSVAQWIMAYLLKNPKLMCKAKEELMEVIGKGNRIEESHMEKLPYLQAIIKEALRMQSSFLIPRKAESEVIISGFTIPKGTQILVNLWASCRDPNLWENPDEFIPERFLESKGKNFEFIPFGNGKRTCPGQGMAMRMLHLIVGSLIHFFNWKLEDGVTPENLNMDAKFGLTLVKAQPVRAIPLLI 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21554909 21557719 + MELO3C005602.2.1 Cme09g01689 338549

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01689 492 Gene3D Cytochrome P450 25 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01689 492 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 1 490 - -
Cme09g01689 492 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01689 492 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01689 492 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01689 492 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01689 492 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01689 492 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01689 492 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 490 - -
Cme09g01689 492 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01689 492 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01689 492 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01689 492 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01689 492 Pfam Cytochrome P450 33 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01689 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Cme09g01689 492 SUPERFAMILY Cytochrome P450 33 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01689 - - - csv:101218561 811.216
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g01689 Cme-Chr9:21554909 Cme09g01693 Cme-Chr9:21585213 8.07E-176 dispersed
Cme09g01688 Cme-Chr9:21550368 Cme09g01689 Cme-Chr9:21554909 1.92E-52 tandem
Cme09g01689 Cme-Chr9:21554909 Cme09g01690 Cme-Chr9:21563789 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g442 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa05g00349 Chy09g01155 . . . . . . . . . . . . . . . . . . Bhi12g00547 . . . . . . Cla01g00330 . . . . . . Lsi09g00352 . . Cme09g01689
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000276 0 5 1 0 1 4 0 5 5 7 5 5 3 10 7 9 5 5 4 5 6 6 4 5 7 13 5 4 4 6 146