Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01755 ATGGATGGGAGGGAAGGCATGGCATTGTCTGGTGGCTCTGCTTCTTATTACATACATAGGGGAGGAGGGGTTGGTGGCTCTGGATCGGGGCTTCCTACGGCTGGATCACATGCCTCCCCTGTATTCCGGCCGATGGCTAACCAGGGTGTTTTGTCTCACTCAAATCTCAGAGGCAACTCAGTTGGATCAACGTATGCCGTTGAGCCATCACATTCGAACTATCTTCGTGGGATGGGTATCAATGTCTCAGCTGGAGTTAACTCTGGTGAACCTGTAAAGAAGAAGAGAGGGAGACCCCGGAAATATGCCCCAGACGGGCAGGTCTCGTTGGGTTTGTCTCCCATGTCTGCTGGTTCTAAGCTCACTCCAGGTTCGAATTCATCTACTCCCAGACGACGACGAGGGCGGCCACCTGGTTCTGGGAGGAAACAACAATTAGCTCTCCTTGGTGATTGGATGAACAATTCGGCTGGACTAGCCTTTGCCCCACATGTTATTCACGTTGGAGCTGGAGAAGACATTGTAGCAAAAGTATTGTCATTTGCACAGCAGAGGCCAAGGGCTGTTTGTGTCTTGTCTGGAAATGGCACTGTTTCTTCCGTAACACTACGTCAGCCTGCATCTACTGGCGTGAGCGTCACATATGAGGGCCATTTCCAGATATTGTGCTTGTCTGGTTCTTACTTGGTGGCTGAAGATGGCGGTCCTCGAAGTAGGACTGGTGGTATTAGTGTTTCCCTTGCCAGTCCTGATGGTCATGTTATTGGTGGCGGTGTCGCTGTTCTTATGGCAGCTGGTCCTGTTCAGGTAGTTGTATGTAGTTTTGTTTATGGTCCAAAGATAAAAAACAAGCAGGTGGCTGGTCCGAAAAGCAATGATGGTTCTGGACATGAGCACCATGATAATTTGGTTTCGCCCACGAGTGCCCCATCTGCCCAAACCTACAATCCGTCTTCAATGGGTGTTTGGCCCGGTTCCCGTTCGGTCGATGTGAGAAACCCTCGTACTGGAATTGACTTGACGCGAGGATGA 1032 50.58 MDGREGMALSGGSASYYIHRGGGVGGSGSGLPTAGSHASPVFRPMANQGVLSHSNLRGNSVGSTYAVEPSHSNYLRGMGINVSAGVNSGEPVKKKRGRPRKYAPDGQVSLGLSPMSAGSKLTPGSNSSTPRRRRGRPPGSGRKQQLALLGDWMNNSAGLAFAPHVIHVGAGEDIVAKVLSFAQQRPRAVCVLSGNGTVSSVTLRQPASTGVSVTYEGHFQILCLSGSYLVAEDGGPRSRTGGISVSLASPDGHVIGGGVAVLMAAGPVQVVVCSFVYGPKIKNKQVAGPKSNDGSGHEHHDNLVSPTSAPSAQTYNPSSMGVWPGSRSVDVRNPRTGIDLTRG 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22028676 22035127 - MELO3C005668.2.1 Cme09g01755 338615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01755 343 MobiDBLite consensus disorder prediction 301 323 - -
Cme09g01755 343 Gene3D - 163 287 - -
Cme09g01755 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 343 IPR039605 GO:0003680
Cme09g01755 343 MobiDBLite consensus disorder prediction 285 343 - -
Cme09g01755 343 MobiDBLite consensus disorder prediction 112 133 - -
Cme09g01755 343 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 343 - -
Cme09g01755 343 MobiDBLite consensus disorder prediction 85 143 - -
Cme09g01755 343 CDD DUF296 163 275 IPR005175 -
Cme09g01755 343 Pfam Plants and Prokaryotes Conserved (PCC) domain 163 276 IPR005175 -
Cme09g01755 343 ProSiteProfiles PPC domain profile profile. 158 299 IPR005175 -
Cme09g01755 343 SUPERFAMILY AF0104/ALDC/Ptd012-like 161 276 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g01755 Cme-Chr9:22028676 Cme10g01713 Cme-Chr10:23718509 9.13E-51 dispersed
Cme11g02151 Cme-Chr11:28950150 Cme09g01755 Cme-Chr9:22028676 2.84E-84 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01755 - - csv:101219973 662.914