Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01772 ATGGATGCCACGGTGGTGTTTGCAGTAGCTGCTTTGGTCGCCACGTACTTGATTTGGTTCTTGAATATCAAACGGTCCTTGAGTGGACCACGTGTTTGGCCACTACTAGGCAGTCTTCCAGGTTTGATTAAGAATAGCCATCGTATGCATGATTGGATTGTTGAGAATTTACGATCCACGGGTGGTACGTACCAGACTTGCATATGCGCCATTCCGCTTTTAACTAAGAAGCAAGGTCTGGTGACTGTCACATGTGACCCAAAGAATTTGGAGCATATTTTGAAGACGCGATTCGAGAACTATCCGAAAGGGCCCAATTGGCAAGCCGTATTTCATGATTTGCTTGGTGATGGAATTTTCAATTCAGATGGTAATATATGGTTGTTCCAACGAAAGACCGCTGCGTTGGAATTTACCACAAGGACTCTTCGTCAAGCCATGGCTCGTTGGGTTAGTCGAGCTATTAAGTCACGATTTTGCCCGATTCTTGAGTCAGCTCAACGTCGAGGGAAGCCTGTTGATCTTCAGGACCTTTTGCTTCGGCTCACATTTGATAATATTTGTGGACTGACTTTTGGTAAGGATCCCCAAACGCTTGCCCCTGAGTTGCCAGAGAATAGCTTCGCTATGGCATTTGATCAAGCCACCGAAGCTACATTGTGTCGCTTTATTTTGCCTACGTTTGTATGGAAGCTGAAGAAATGGCTCCGACTGGGGATGGAAGTCACCTTAACCCAAAGCCTTGACCACACAAATCAATATTTAACCAATATCATCAACACACGTAAGCACGAATTATCCAATCAGCAACAGGTCAACACTAATCAAACCCCTCACGACGACTTGCTATCAAGATTCATGAAAAAGAAGGAATCCTACTCAGACACATTCCTCCAACACGTGGCACTCAATTTCATCCTAGCTGGAAGAGACACCTCATCCGTCGCCCTGAGCTGGTTCTTCTGGCTAGTCATCCAAACCCCAAGTGTGGAGGAAAAAATCCTCGAAGAAATCTGCACCGTCCTGATGGAGACACGTGGCAAAGAAATGTCTACGTGGACGGAAGAGCCATTAGGATTTGAAGAAGTCGATCGATTAGTTTACCTCAAAGCCGCCTTATCGGAAACCCTCCGACTCTACCCATCGGTGCCGGAAGATTCAAAACATGTGATAAACGATGACGTTTTACCCACCGGGACTTTCGTCCCTGCCGGCTCCTCCGTCACATATTCAATATATTCAATTGGTCGAATGAAATTCATCTGGGGAGAAGATTGCTTAGAATTCAAACCAGAGAGATGGTTAGATACAAATGAAAATGCTTATAAATTCGTCGCCTTTAATGCCGGCCCAAGAATTTGTTTAGGAAAAGATTTGGCTTATTTACAAATGAAGTCCATTGCGGCAGCGGTCTTGCTCCGCCACCGCCTGACGGTGGTTCCCGGCCACCGTGTTGAGCAAAAGATGTCGTTGACGTTGTTCATGAAGTATGGCCTTAAAGTTCACTTGCATCCCAGAGATTTAGGCCATGTGGTGGAGAAAATTAGCAAAACCGTGGCGGAGACGGCGACTTGA 1575 45.9 MDATVVFAVAALVATYLIWFLNIKRSLSGPRVWPLLGSLPGLIKNSHRMHDWIVENLRSTGGTYQTCICAIPLLTKKQGLVTVTCDPKNLEHILKTRFENYPKGPNWQAVFHDLLGDGIFNSDGNIWLFQRKTAALEFTTRTLRQAMARWVSRAIKSRFCPILESAQRRGKPVDLQDLLLRLTFDNICGLTFGKDPQTLAPELPENSFAMAFDQATEATLCRFILPTFVWKLKKWLRLGMEVTLTQSLDHTNQYLTNIINTRKHELSNQQQVNTNQTPHDDLLSRFMKKKESYSDTFLQHVALNFILAGRDTSSVALSWFFWLVIQTPSVEEKILEEICTVLMETRGKEMSTWTEEPLGFEEVDRLVYLKAALSETLRLYPSVPEDSKHVINDDVLPTGTFVPAGSSVTYSIYSIGRMKFIWGEDCLEFKPERWLDTNENAYKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVVPGHRVEQKMSLTLFMKYGLKVHLHPRDLGHVVEKISKTVAETAT 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22177392 22179127 - MELO3C005686.2.1 Cme09g01772 338632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01772 524 PANTHER CYTOCHROME P450 5 508 - -
Cme09g01772 524 SUPERFAMILY Cytochrome P450 20 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01772 524 Pfam Cytochrome P450 28 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01772 524 PANTHER CYTOCHROME P450 86A7 5 508 - -
Cme09g01772 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Cme09g01772 524 Gene3D Cytochrome P450 23 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01772 524 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01772 524 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01772 524 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01772 524 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01772 524 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01772 524 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01772 524 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01772 524 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme09g01772 524 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02420 Cme-Chr1:32482869 Cme09g01772 Cme-Chr9:22177392 3.00E-156 dispersed
Cme04g01598 Cme-Chr4:23256961 Cme09g01772 Cme-Chr9:22177392 1.77E-138 dispersed
Cme08g00489 Cme-Chr8:3017737 Cme09g01772 Cme-Chr9:22177392 5.05E-114 dispersed
Cme05g00899 Cme-Chr5:12129566 Cme09g01772 Cme-Chr9:22177392 1.23E-121 transposed
Cme06g01814 Cme-Chr6:21203204 Cme09g01772 Cme-Chr9:22177392 1.62E-102 transposed
Cme12g00101 Cme-Chr12:998669 Cme09g01772 Cme-Chr9:22177392 0 transposed
Cme11g02166 Cme-Chr11:29045454 Cme09g01772 Cme-Chr9:22177392 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01772 K15398 - csv:101216733 1023.08