Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01774 ATGGCTCGGTTGGTTCTACCATGCAAGAGCGTGGGATTGGCAAGGAATAACCTCTTGGGTTTGATTTCATCTGCTCCTGCTCGAGCTGCACATCAGCGTGTTAATTCATTTGGAATTTCAGTCAAACGTAGCACTAGACAGAGGCCCTTATTCACTTCACAGGTGAAATCTGGACTGAATTATCGGTTTCCATATCATTTGCCGTTTGGGGCTAAACAAGCTAGTAGGAAGCTGATTTGTTCAGTTGCAACAGAAGCATTGCAAGAAAAAGCTGAAGAGAACAAAATGGGTGCACCTAAAGAAATATTTTTGAAAGATTACAAAATGCCTGATTACTATTTTGACACGGTCGATTTGAAATTTTTGTTGGGTGAGGAGAAAACAATTGTCAATTCAAGAATAACGGTGTTCCCTAGAGTTGAAGGGTCCAAAGCTCCTCTGGTTTTGAATGGTGAGGATGCGAAGTTGATTTCAATTAAGATTAATAGTGAGGACCTGAAGGAGGGTGATTACCATCTGGACTCCCGCCAATTGACAATTGTATCACCGCCGGCTGGAGCTTTTACTTTGGAAATTACCAATGAGATACAGCCTCAGAAAAACACATCTTTGGAGGGACTCTATAAATCATCTGGAAATTTCTGCACACAATGTGAAGCTGAAGGTTTCCGGAAGATCACATATTACCAGGATCGTCCAGATATAATGGCAAAGTACACATGTCGCATAGAAGCCGATAAGTCATTGTACCCAGTGCTGCTCTCTAATGGAAATCTTATAGACCAGGGTGATTTAGAGTCATCACAAGCGCTGTTTCTGCAGGGTGGAAAACATTATGCCCTTTGGGAGGATCCCTTTAAGAAACCCTGCTACTTGTTTGCTTTAGTAGCTGGCAAGTTGGTAAGCAGAGATGATATTTTTATTACTCGTTCGGGTAGGAAAGTCTCCTTGAAGATATGGACTCCAGCCGAAGACTTCCCCAAGACTGAGCATGCCATGTATTCCTTGAAGGCAGCTATGAAATGGGATGAAGATGTTTTTGGATTAGAATATGATCTGGATCTCTTCAATATTGTGGCTGTTCCAGATTTCAACATGGGAGCCATGGAAAACAAGAGTCTGAATATTTTCAATTCAAAACTTGTCTTGGCATCTCCGTTAACTGCTTCTGATTCAGATTATGCTGCCATATTAGGAGTGATTGGTCATGAGTATTTCCACAACTGGACTGGCAACAGGGTGACATGTCGTGATTGGTTCCAGCTGAGCCTGAAGGAAGGCCTTACTGTTTTCCGTGATCAGGAATTTTCATCTGACATGGGAAGTCGTGCTGTGAAAAGAATTGCCGATGTTTCAAGACTTAGAAACTATCAGTTTCCTCAGGATGCTGGTCCCATGGCTCATCCAGTTCGACCACATTCCTATATCAAGGAATTTCTTTTTGAACCTTGGGTTTTCAATTTGCTTCTTCTATCAAGTTATGATCTGACAAGGGTCCTGTACCAACTTGAACATGCAGTGACGGTAGGCTTTATCAAGGGCATGGATCTTTACTTTAAGAGACATGATGGTCAGGCTGTTACCTGTGAAGATTTCTTCGCCGCAATGCGAGATGCAAATCATGCTGATTTTGCTAACTTCTTATTATGGTACTTGGAATTCCACAGGCAAGATGTTCCGCCAACTCCTGGGCAGCCAATTAAAGAGCCAATGTTTATACCTGTTGATCTTGGTTTGCTAGGCTCGTCTGGTCGTGATTTGCCTCTTTCCTCCGTATATAATGATGGGGTATTGCGGTCTATATCTGGAGATAATCAGCCAGTCTTCTCCACAGTCCTCAGGCTGACTAAGAAAGAAGAAGAGTTTGTCTTCTCGGATATACCTGAGCGGCCAGTTCCATCTTTGTTTAGGGGCTACAGTGCTCCTGTCCGAGTGGAAACAGATCTATGTGACGATGATCTATTTTTCCTCCTTGCCAATGATTCAGATGAGTTCAACCGTTGGGAGGCTGGACAAGTGTTGGCACGAAAATTGATGCTCCAACTGGTGGCTGATCACCAGCAAAATAAGCCATTGGTTCTCAACTCAAAGTTCATTCAGGGTTTGAACTCCATACTTTGTGACGCGAGCTTGGATAAAGAATTCATTGCCAAAGCAATAACTCTTCCTGGCGAAGGGGAAATAATGGACATGATGGAGGTTGCAGATCCTGATGCTGTTCATGCTGTTCGAACTTTCATTAGGAAGGAACTGGCCAATGCATTGAAAGCAGAGCTTCTTGCTACAGTAGAAGAGAATAGGAGTTCAGAAGCATATGAATTTAACCATCCTGAAATGGCTAGGCGTGCTTTGAAGAATATTGCTCTAGCATATCTTGCAGTAACTGAGGATGCTGAGATTGCCAGTCTTGTGCTTCATGAGTATAAGAATGCCTCGAATATGACTGAGCAATTTGCAGCTTTGGCGGCTATAGCTCAGAAGCCAGGTGAAACTCGTGATGAGATTCTTGCTGACTTCTATGACAAGTGGCAGCATGACTATTTGCTTGAGAGTTGGGAGCTTAAGAATGTCAGTAGCATCCAAGATTCTGATAGCAGAGAAAATCAGTTTATTTTGTGGGTTGTCAATAAATGGTTTGCTCTTCAAGCCATGTCAGACATTCCTGGTAATGTCGAGAATGTTCGGAACCTCCTAAATCACAAAGCCTTTGACTTGCGAAATCCAAACAAGGTATATTCTTTGATTGGAGGCTTCTGCGGATCAATCGTCAACTTTCATGCAAAGGACGGATCAGGCTACAATTTCTTGGGAGACATTGTCATGCAACTAGACAAAATTAATCCCCAGGTTGCCTCTCGAATGGTCTCTGCCTTCTCGAGATGGAGGCGTTACGACGAACAGCGACAAAAACTTGCTAAGGCACAACTGGAGAGGATAATGTCTGCCAATGGACTGTCCGAAAATGTGTTTGAAATTGCATCAAAAAGCTTAGCAGCTTGA 3000 42.97 MARLVLPCKSVGLARNNLLGLISSAPARAAHQRVNSFGISVKRSTRQRPLFTSQVKSGLNYRFPYHLPFGAKQASRKLICSVATEALQEKAEENKMGAPKEIFLKDYKMPDYYFDTVDLKFLLGEEKTIVNSRITVFPRVEGSKAPLVLNGEDAKLISIKINSEDLKEGDYHLDSRQLTIVSPPAGAFTLEITNEIQPQKNTSLEGLYKSSGNFCTQCEAEGFRKITYYQDRPDIMAKYTCRIEADKSLYPVLLSNGNLIDQGDLESSQALFLQGGKHYALWEDPFKKPCYLFALVAGKLVSRDDIFITRSGRKVSLKIWTPAEDFPKTEHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPLTASDSDYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRAVKRIADVSRLRNYQFPQDAGPMAHPVRPHSYIKEFLFEPWVFNLLLLSSYDLTRVLYQLEHAVTVGFIKGMDLYFKRHDGQAVTCEDFFAAMRDANHADFANFLLWYLEFHRQDVPPTPGQPIKEPMFIPVDLGLLGSSGRDLPLSSVYNDGVLRSISGDNQPVFSTVLRLTKKEEEFVFSDIPERPVPSLFRGYSAPVRVETDLCDDDLFFLLANDSDEFNRWEAGQVLARKLMLQLVADHQQNKPLVLNSKFIQGLNSILCDASLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRKELANALKAELLATVEENRSSEAYEFNHPEMARRALKNIALAYLAVTEDAEIASLVLHEYKNASNMTEQFAALAAIAQKPGETRDEILADFYDKWQHDYLLESWELKNVSSIQDSDSRENQFILWVVNKWFALQAMSDIPGNVENVRNLLNHKAFDLRNPNKVYSLIGGFCGSIVNFHAKDGSGYNFLGDIVMQLDKINPQVASRMVSAFSRWRRYDEQRQKLAKAQLERIMSANGLSENVFEIASKSLAA 999
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22185488 22194688 - MELO3C005688.2.1 Cme09g01774 338634

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01774 999 Pfam Peptidase M1 N-terminal domain 118 292 IPR045357 -
Cme09g01774 999 Pfam Domain of unknown function (DUF3458) Ig-like fold 556 647 IPR035414 -
Cme09g01774 999 Gene3D tricorn interacting facor f3 domain 109 300 IPR042097 -
Cme09g01774 999 PRINTS Membrane alanyl dipeptidase (M1) family signature 364 374 IPR001930 GO:0006508
Cme09g01774 999 PRINTS Membrane alanyl dipeptidase (M1) family signature 224 239 IPR001930 GO:0006508
Cme09g01774 999 PRINTS Membrane alanyl dipeptidase (M1) family signature 419 431 IPR001930 GO:0006508
Cme09g01774 999 PRINTS Membrane alanyl dipeptidase (M1) family signature 400 415 IPR001930 GO:0006508
Cme09g01774 999 PANTHER - 556 859 IPR012779 GO:0008270
Cme09g01774 999 PANTHER - 62 551 IPR012779 GO:0008270
Cme09g01774 999 PANTHER - 873 999 IPR012779 GO:0008270
Cme09g01774 999 Gene3D - 302 385 - -
Cme09g01774 999 Gene3D - 872 998 IPR037144 -
Cme09g01774 999 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 101 298 IPR042097 -
Cme09g01774 999 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 310 550 - -
Cme09g01774 999 Pfam Peptidase family M1 domain 334 547 IPR014782 GO:0008237|GO:0008270
Cme09g01774 999 PANTHER BNAC06G01820D PROTEIN 556 859 - -
Cme09g01774 999 PANTHER BNAC06G01820D PROTEIN 62 551 - -
Cme09g01774 999 PANTHER BNAC06G01820D PROTEIN 873 999 - -
Cme09g01774 999 Pfam Domain of unknown function (DUF3458_C) ARM repeats 874 998 IPR024601 -
Cme09g01774 999 Pfam Domain of unknown function (DUF3458_C) ARM repeats 651 849 IPR024601 -
Cme09g01774 999 Gene3D - 650 868 IPR037144 -
Cme09g01774 999 CDD M1_APN 106 551 - -
Cme09g01774 999 Gene3D Neutral Protease Domain 2 387 551 IPR027268 -
Cme09g01774 999 Gene3D - 552 647 IPR038438 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01774 K01256 pepN; aminopeptidase N [EC:3.4.11.2] - csv:101216008 1677.14
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g00600 Cme-Chr9:6232375 Cme09g01774 Cme-Chr9:22185488 9.55E-10 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g302 . . . . . . Bma07g01666 . . . Cma02g01441 . Car02g01208 . . . Cpe05g00346 . . . . . . . . . . . . . . Cone8ag0292 Cone12ag0298 . . . Csa05g00269 Chy09g01240 . . . . Bda09g00031 . . . . . Cmo02g01477 Cmo15g01300 . . . . . Cpe13g00149 Bhi12g00279 . . Lac11g2075 Hepe06g1533 . Lcy12g1636 Cla01g00252 Cam01g0258 Cec01g0250 Cco01g0263 Clacu01g0256 Cmu01g0245 Cre09g2264 Lsi09g00243 . . Cme09g01774
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004484 2 1 1 2 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 2 1 2 1 1 1 1 2 1 2 42