Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01791 ATGGCTACTAAAGAATCGAGTTCTACCACTGCCACTGAAGGCAAGATTAAAGGGGTTCTTACTCATGGTGGGCGATATGTGCAGTATAATGTGTACGGTAACTTGTTTGAGGTTTCAGCCAAGTATGTTCCTCCTTTACGACCTATTGGTAGAGGTGCTTATGGTCTTGTTTGTGCTGCTGTAAATTCAGAGACACATGAAGAGGTTGCCATCAAGAAAATTGGAAATGCCTTTGATAACATAATCGACGCCAAAAGGACTTTGAGAGAAATTAAGCTTCTTTGCCATATGGAACATGAAAATATTATCGCTATTAGAGACATCATTAGGCCGCCAAAAAGAGAGGTTTTTAATGATGTGTATATTGTTTACGAATTGATGGACACTGATCTTCATCAAATAATTCGTTCTGACCAACCACTGACGGATGATCATTGCCAGTACTTTTTATATCAGTTATTGCGTGGGCTGAAATATGTACACTCAGCTAAGGTCCTGCACCGTGATCTCAAGCCTAGCAACCTGCTTCTGAATGCAAATTGCGACCTTAAAATTGGAGACTTTGGGTTGGCAAGGACAACTTCTGAAACCGACTTCATGACTGAATACGTGGTTACTCGCTGGTACCGAGCACCGGAATTGCTCCTCAATTGTTCAGAGTACACTGCTGCTATTGATGTTTGGTCTGTAGGATGCATACTTGGTGAGATAATGACTAGAGAACCTCTCTTCCCTGGCAAAGATTATGTTCATCAACTCAGACTTATAACTGAGCTACTAGGATCACCAGATGATGCCAGCCTAGGATTTCTCCGAAGTGATAATGCTCGAAGATATGTCAAGCAGCTTCCACAATACAGAAAACAACAATTCTCAGCTAGATTTCCCAACATGTCTCCATCTGCCCTTGATCTTCTCGAAAAGATGCTCGTATTTGATCCCAACAAACGCATTACAGTGGAGGAAGCACTTTGTCACCCATACTTGCAATCTCTTCACGACATCAACGACGAGCCAGTCTGTGCCAGGCCTTTCAATTTTGATTTTGAGCAACCGTCGTGCACTGAAGAGCATATTAAAGAACTGATCTGGAAAGAATCTGTCAGGTTCAATCCCGACGAATCCGCTAGGAGGACGACTCTTTGCGTTTGA 1152 42.53 MATKESSSTTATEGKIKGVLTHGGRYVQYNVYGNLFEVSAKYVPPLRPIGRGAYGLVCAAVNSETHEEVAIKKIGNAFDNIIDAKRTLREIKLLCHMEHENIIAIRDIIRPPKREVFNDVYIVYELMDTDLHQIIRSDQPLTDDHCQYFLYQLLRGLKYVHSAKVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSDNARRYVKQLPQYRKQQFSARFPNMSPSALDLLEKMLVFDPNKRITVEEALCHPYLQSLHDINDEPVCARPFNFDFEQPSCTEEHIKELIWKESVRFNPDESARRTTLCV 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22327506 22331911 - MELO3C005705.2.1 Cme09g01791 338651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01791 383 SMART serkin_6 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g01791 383 Gene3D Transferase(Phosphotransferase) domain 1 127 356 - -
Cme09g01791 383 Pfam Protein kinase domain 47 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g01791 383 Gene3D Phosphorylase Kinase; domain 1 26 366 - -
Cme09g01791 383 ProSiteProfiles Protein kinase domain profile. 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g01791 383 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 18 374 - -
Cme09g01791 383 ProSitePatterns MAP kinase signature. 78 181 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cme09g01791 383 CDD STKc_TEY_MAPK 36 372 - -
Cme09g01791 383 ProSitePatterns Protein kinases ATP-binding region signature. 49 73 IPR017441 GO:0005524
Cme09g01791 383 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 18 374 - -
Cme09g01791 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Cme09g01791 383 SUPERFAMILY Protein kinase-like (PK-like) 46 337 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g01791 Cme-Chr9:22327506 Cme12g00271 Cme-Chr12:3136210 2.28E-176 dispersed
Cme03g01425 Cme-Chr3:23635980 Cme09g01791 Cme-Chr9:22327506 0 transposed
Cme04g01043 Cme-Chr4:14328775 Cme09g01791 Cme-Chr9:22327506 8.79E-30 transposed
Cme07g01677 Cme-Chr7:22367188 Cme09g01791 Cme-Chr9:22327506 7.84E-146 transposed
Cme12g00284 Cme-Chr12:3472518 Cme09g01791 Cme-Chr9:22327506 0 transposed
Cme11g02185 Cme-Chr11:29178118 Cme09g01791 Cme-Chr9:22327506 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65174 PF00069 Pkinase 6.20E-71 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01791 - - csv:101214254 776.163