Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme09g01866 | ATGGGGGAGAAGTTCCACATGAAACCATCTGAGAAAAAGAAAAGAAAAGAAAAGAAAACAAACATTCTTTTTTTTCAGCTTTTGATAATCTCATCACCACTTTCAAGGTTACAACTTTACTCTTTTTCTAACAAAACCCTTCCAAAATTTTCTTCATTAATTTCCATGGATACTGCTCAATGGCCACAGGAGATTGTGGTGAAGCCGATTGAAGAAATTGTGACAAACACATGTCCGAAACCAAGTGTTTCAATTTTAGAGAGAAAAATTAGACCACAGAAGGAACAAGCTTTGAATTGTCCAAGGTGTAATTCAAGCAACACAAAGTTTTGTTATTACAATAATTATAGTCTCACACAACCAAGATACTTTTGCAAAACTTGTAGAAGGTATTGGACTGAAGGTGGATCTTTAAGAAACATTCCTGTTGGTGGAGGCTCAAGAAAAAACAAAAGACCTTCTTCTTCTTCTTCTAATTCTTCATCATCTACATCTCCCACACAACCTACTTCTTCTTCTCAACCTAATTTCCCCAAGAAAATTCTTGACCATCAGCTCCCTCAAAACCCTAAAATCACTCCCTCCCAAGATCTCAACTTGTTTTTTCCACCCTCAAACAATCAAGATCATCATCATTTCACCACCAGTAACAACAACCTCTCCGAAATGATTCTCGTCGGTAGTAACCCTTCGATTAATAATAATGCCACCTCTTCCTCGGCTTCTGCGACGACGACAATGTCGTCGCCGCCCCCATCACAACCTTCTGTGATGGAGCTTCTCACCGGGATGGCGAATAACAACAACAACAACTCTAGTAGGGGTTTGAATTGTTTCGTTCCGATGTCGTCGGTTGTTGTCCCTGATCCTAGCTCTGTTTACACTGGAGGGTTTCCTGATCTTCAAGATCAATTCAAGCCGAGCCTTGGATTCTCTCTCGATGGATATGGTGTCGTCTCGACTGAGGCGGGTAATGGGGCGGGGAGGCTTATGCAGCTGCCATTTGAGGATTTGAAGCAAGGGTCTAATGGAGTTGATCAACAAGGGAAAGAGCAAGGAAATGATCATAATTCAAGTGGGTATTGGAGTGGAATGTTGGGTGGAGGATCATGGTAA | 1116 | 41.31 | MGEKFHMKPSEKKKRKEKKTNILFFQLLIISSPLSRLQLYSFSNKTLPKFSSLISMDTAQWPQEIVVKPIEEIVTNTCPKPSVSILERKIRPQKEQALNCPRCNSSNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSSNSSSSTSPTQPTSSSQPNFPKKILDHQLPQNPKITPSQDLNLFFPPSNNQDHHHFTTSNNNLSEMILVGSNPSINNNATSSSASATTTMSSPPPSQPSVMELLTGMANNNNNNSSRGLNCFVPMSSVVVPDPSSVYTGGFPDLQDQFKPSLGFSLDGYGVVSTEAGNGAGRLMQLPFEDLKQGSNGVDQQGKEQGNDHNSSGYWSGMLGGGSW | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 22846755 | 22849025 | + | MELO3C005774.2.1 | Cme09g01866 | 338726 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme09g01866 | 371 | MobiDBLite | consensus disorder prediction | 149 | 179 | - | - | |
Cme09g01866 | 371 | ProSitePatterns | Zinc finger Dof-type signature. | 100 | 136 | IPR003851 | GO:0003677|GO:0006355 | |
Cme09g01866 | 371 | MobiDBLite | consensus disorder prediction | 339 | 371 | - | - | |
Cme09g01866 | 371 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 56 | 368 | IPR045174 | GO:0003700|GO:0006355 | |
Cme09g01866 | 371 | MobiDBLite | consensus disorder prediction | 188 | 214 | - | - | |
Cme09g01866 | 371 | MobiDBLite | consensus disorder prediction | 139 | 214 | - | - | |
Cme09g01866 | 371 | PANTHER | DOF ZINC FINGER PROTEIN DOF4.6-LIKE | 56 | 368 | - | - | |
Cme09g01866 | 371 | MobiDBLite | consensus disorder prediction | 341 | 365 | - | - | |
Cme09g01866 | 371 | ProSiteProfiles | Zinc finger Dof-type profile. | 98 | 152 | IPR003851 | GO:0003677|GO:0006355 | |
Cme09g01866 | 371 | MobiDBLite | consensus disorder prediction | 234 | 256 | - | - | |
Cme09g01866 | 371 | Pfam | Dof domain, zinc finger | 96 | 152 | IPR003851 | GO:0003677|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g02321 | Cme-Chr4:30156803 | Cme09g01866 | Cme-Chr9:22846755 | 6.37E-32 | dispersed | |
Cme06g00082 | Cme-Chr6:526322 | Cme09g01866 | Cme-Chr9:22846755 | 4.73E-36 | dispersed | |
Cme06g01166 | Cme-Chr6:9078957 | Cme09g01866 | Cme-Chr9:22846755 | 2.15E-39 | dispersed | |
Cme09g01866 | Cme-Chr9:22846755 | Cme11g01764 | Cme-Chr11:25878348 | 2.81E-39 | dispersed | |
Cme09g01866 | Cme-Chr9:22846755 | Cme09g02002 | Cme-Chr9:23789471 | 4.33E-44 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
41995 | PF02701 | zf-Dof | 7.20E-33 | No_clan | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme09g01866 | - | - | cmo:103482848 | 563.918 |