Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01869 ATGAGTTGCGGTTCGGATTTGATTATGTCTCGGAATTCTGAGGCTGATGATCGTGAGATTGTTGAGAAGGATCCATCTGGACGATATATACGGGGATCCACTAGTGCTGATTATGAATTGAATTATGATGAGATATTGGGTAAAGGGGCATTCAAGACAGGTATGATGAGATTTCGGGGTGTATTGTTTGATCTGAGGTCTATTTTTGCTGTCATCAGTTACAAAGCATTCGATGAAGTTGGTGGAATCGAAGTTGCTTGGAGTCAGGTGGACATTGAAGATGTCTTGCAGTCACCAGAGCAACTCCAAAGATTATATTCTGAGGTCCATCTGTTGAAGTCACTGAAACATGAAAATATCATCAAGTTCTATAGCTATTGGGTTGATGATAAACATAAGACTATCAACATGATTACAGAATTGTTCACTTCTGGGAGTTTGAGGCAATATCGAAAGAAGCATAGGAAAGTTGACTTGAAGGCCTTCAAGAACTGGGCAAGGCAGATACTGCGAGGTTTAACGTATTTGCATGGTCACAACCCTCCAATCATTCACAGGGATTTGAAATGTGATAATATATTTGTCAATGGAAATACTGGAGAAGTTAAAATTGGAGATCTCGGATTGGCAATTGTCATGCAGCAGCCTACTGCTCGAAGTGTAATTGGCACTCCAGAGTTCATGGCTCCAGAACTTTATGATGAGGACTATAATGAACTTGTTGACATATATTCTTTTGGCATGTGCATGTTGGAAATTGTTACTTGTGAATACCCATATAATGAGTGCAAAAATTCTGCCCAAATATTCAAGAAGGGTATAAAGCCCGCTTCCCTTGAGAAAGTGTTGGATCCTCAAGTTAAGCAATTCATTGAGAAGTGTCTGGTTCCTGCATCCATGAGATTACCTGCTAGTGAACTCCTGAAAGATCCTTTCCTTGTGGCCGAAAGCCCTAAGGAGCATAGCTCTGAACTTTCAAGGTCATTGAATGAGCAGTTCAAATCTGTGAATCCTCCACTGCTTGGTTCTCATCCTATGGACACCGACCATAAGTGCACCAAACTCTCAGGCTCAGTGGCTTCATCTGTCAAAAGCAATAATGGAATTTCTCACTTTTCAACTCAAGAACTTCAGAGGCTCACTGAGAACAATGAATTGACACTGAAAGGAGAAATGACTGATCATAATACAATGTCATTCCATTTGCGTATTGCTGAACTATATGGTAAATCTAGGAATATCCATTTTGCCTTCTATCTCGACTCTGATACTTCTTTGGCAATTGCTTTGGAGATGGTCGAACAACTTGAACTGTCGAATGAAGATGCGACTATCATAGCGAAACTAATCGATGAGTTAATTGCTAAGTTTGTTCCTAGCTGGAAACCATGTCCAAACTATTGTGAAGAAGAACAACAAAATACTCCTGATAGTCCTTCTGAAGCTCAAGAGGAAAAGAGCTTCATTTCTCCTTTCTTCTCTGAGCTGGTACTGTCATCTCCCATGGTGGTTGCTGCAAGGAATAATCTGACGGGTTTGGCAAAGGTCGAAGATCAAGAAAACCAGCAGTCGATTATTTCGTGTGCTTCCGCGGAATACATTTACTCAACTGTCTCAGACTACAGCATAGGAAAAGGATCAGAGTGTGGTGAGTTTGGCCACCCTGACTGCGAAAAGGCTTATATTAGCAGTGGAACAATTGATTTAGATGCAGAAGCTGTTGGATCTACTATTTCGACGATGATCGATTTTGCAAAACCATCTCTAATCTCTTCCTGCTCAGGAATGTCGAAAGAATTGAGTTTGTCTAGCTTTTCAACTCTTTCTATGGAAGAAAGAGATCACCAAGATGAACTGAAGATGGAGATTGATGCTATTGATCTGCAGTATCATCAATGCCTTTGTGAACTGTCAAGAATGAGAGAGGAAGCAATAGAAAGTGCTAAGAAGAGGTGGATGTCTAAGAAGAAAGCCACTGGTATTTGA 1986 40.63 MSCGSDLIMSRNSEADDREIVEKDPSGRYIRGSTSADYELNYDEILGKGAFKTGMMRFRGVLFDLRSIFAVISYKAFDEVGGIEVAWSQVDIEDVLQSPEQLQRLYSEVHLLKSLKHENIIKFYSYWVDDKHKTINMITELFTSGSLRQYRKKHRKVDLKAFKNWARQILRGLTYLHGHNPPIIHRDLKCDNIFVNGNTGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYDEDYNELVDIYSFGMCMLEIVTCEYPYNECKNSAQIFKKGIKPASLEKVLDPQVKQFIEKCLVPASMRLPASELLKDPFLVAESPKEHSSELSRSLNEQFKSVNPPLLGSHPMDTDHKCTKLSGSVASSVKSNNGISHFSTQELQRLTENNELTLKGEMTDHNTMSFHLRIAELYGKSRNIHFAFYLDSDTSLAIALEMVEQLELSNEDATIIAKLIDELIAKFVPSWKPCPNYCEEEQQNTPDSPSEAQEEKSFISPFFSELVLSSPMVVAARNNLTGLAKVEDQENQQSIISCASAEYIYSTVSDYSIGKGSECGEFGHPDCEKAYISSGTIDLDAEAVGSTISTMIDFAKPSLISSCSGMSKELSLSSFSTLSMEERDHQDELKMEIDAIDLQYHQCLCELSRMREEAIESAKKRWMSKKKATGI 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22863296 22867101 + MELO3C005777.2.1 Cme09g01869 338729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01869 661 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 656 - -
Cme09g01869 661 SMART serkin_6 40 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g01869 661 Gene3D Transferase(Phosphotransferase) domain 1 142 319 - -
Cme09g01869 661 ProSiteProfiles Protein kinase domain profile. 40 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g01869 661 CDD STKc_WNK 28 313 - -
Cme09g01869 661 Gene3D - 396 490 - -
Cme09g01869 661 PANTHER WNK KINASE 12 656 - -
Cme09g01869 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Cme09g01869 661 Pfam Protein kinase domain 77 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g01869 661 SUPERFAMILY Protein kinase-like (PK-like) 74 314 IPR011009 -
Cme09g01869 661 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 408 455 IPR024678 GO:0004674|GO:0005524
Cme09g01869 661 Gene3D Phosphorylase Kinase; domain 1 13 140 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g00078 Cme-Chr6:495461 Cme09g01869 Cme-Chr9:22863296 0 dispersed
Cme09g01869 Cme-Chr9:22863296 Cme12g01658 Cme-Chr12:23634019 6.61E-145 dispersed
Cme09g01869 Cme-Chr9:22863296 Cme11g01446 Cme-Chr11:21379247 1.00E-135 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65177 PF00069 Pkinase 1.10E-45 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01869 K08867 - csv:101207748 1189.1