Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01902 ATGGGCTCTCAGGACTCAGGTGAAGATTGCCTCGGTTGGGCTGCAAGAGACTCATCTGGGTTTCTATCTCCTTACAAATTCAATCGTAGGGTTCTTGGAGATGATGATGTTTCAATTACAATAACACACTGCGGAATTTGTTATGCAGATGTAGTATGGACAAGAAATAAATTAGGAGATTCGAAATATCCTTTAGTGCCTGGACATGAGATTGCAGGAATCGTGAAAAATGTTGGCGCAAATGTTCAGCGATTTAAAGTTGGAGATCATGTTGGGGTAGGAACTTATGTGAATTCTTGCAGACAATGCGAGTACTGTGAAGATTGTCAAGAAGTTAGTTGCACAAGTGGATGCACTCATACTTTTAATTCAATTGATTTTGACGGTACAATTACAAAGGGAGGATACTCCAACTACATTGTTGTTCACGAGAGATATTGCTACAAAATACCTGACAATTATCCATTAGCTTCAGCTGCTCCTTTGCTTTGTGCTGGAATTACTGTTTATTCTCCCATGATTCGGCATAATATGAATCAACCTGGTAAATCTCTTGGAGTGATAGGCCTTGGTGGTCTCGGGCACTTAGCAGTGAAGTTTGGGAAGGCTTTTGGACTTAATGTGACAGTTTTTAGCACTAGCATATCCAAGAAAGAAGAAGCCCTTAGCGTTCTTGGAGCAGACAAATTTGTTCTCTCATCTGACAACAAGCAAATGGAGGCCTTGTCTAAGTCCCTTGACTTTATTATCGATGCTGCGTCTGGTGATCACCCATTTGATCCATACATGTCTACGTTGAAGGTTGGTGGCGTTATGGTTCTGGTGGGGTTTCCTTCTGAAGTCAAGTTCATTCCTGCTAGCCTTATTTTGGGTATGAGAACCATTTCTGGTAGCGTGACTGGTGGTACTAAATTGACTCAAGAAATGATCGATTTCTGTGCTGCTCATGGAATCTATCCAAACATAGAAGTGATTCCAATTCAGTATTCTAATGAAGCCATCGAAAGGGTAACGAAGAATGATGTCAAGTACCGATTTGTTATTGATATCGAAGGCTCTCTGAAATGA 1068 40.92 MGSQDSGEDCLGWAARDSSGFLSPYKFNRRVLGDDDVSITITHCGICYADVVWTRNKLGDSKYPLVPGHEIAGIVKNVGANVQRFKVGDHVGVGTYVNSCRQCEYCEDCQEVSCTSGCTHTFNSIDFDGTITKGGYSNYIVVHERYCYKIPDNYPLASAAPLLCAGITVYSPMIRHNMNQPGKSLGVIGLGGLGHLAVKFGKAFGLNVTVFSTSISKKEEALSVLGADKFVLSSDNKQMEALSKSLDFIIDAASGDHPFDPYMSTLKVGGVMVLVGFPSEVKFIPASLILGMRTISGSVTGGTKLTQEMIDFCAAHGIYPNIEVIPIQYSNEAIERVTKNDVKYRFVIDIEGSLK 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 23162589 23168938 - MELO3C005809.2.1 Cme09g01902 338762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01902 355 Gene3D - 165 320 - -
Cme09g01902 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Cme09g01902 355 CDD CAD1 12 349 - -
Cme09g01902 355 Pfam Zinc-binding dehydrogenase 192 313 IPR013149 -
Cme09g01902 355 PANTHER ALDEHYDE REDUCTASE 7 354 - -
Cme09g01902 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Cme09g01902 355 Pfam Alcohol dehydrogenase GroES-like domain 35 150 IPR013154 -
Cme09g01902 355 Gene3D - 13 350 - -
Cme09g01902 355 PANTHER - 7 354 - -
Cme09g01902 355 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 185 212 IPR029752 -
Cme09g01902 355 SMART PKS_ER_names_mod 14 348 IPR020843 GO:0016491
Cme09g01902 355 SUPERFAMILY GroES-like 17 183 IPR011032 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g01902 Cme-Chr9:23162589 Cme11g00085 Cme-Chr11:721295 8.23E-114 dispersed
Cme09g01902 Cme-Chr9:23162589 Cme06g01378 Cme-Chr6:12016238 2.41E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01902 K00083 - csv:101211438 692.189