Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01911 ATGGCACAATTTGAGATTGTACGCGTGGACTCCCCCAAGCGCAGCCAAATTCTTGATGTCTCTCTAACTCGAAAGGTGGCAGCAGAATTTGTGGGGACGTTCATCTTGATATTTGGTGCAACAGCTGCACCCATCGTCAACCAAAAGTACAACTCCCCCATGTCACTGATTGGAAACGCCGCATGTTCTGGCATAGCTGTGATGATCGTAATTTTCTCAATAGGACACATCTCTGGTGCCCACCTGAATCCGTCACTCACCATCGCCTTGGCCACCCTCCGCCACTTCCCTTTGGCCCATGTCCCCGCCTACATCACCGCCCAGGTCTCTGCTTCCATCTGTGCCTCCTTCGCTCTTAAGGGCGTTTTTCACCCTTTCATGTCTGGTGGTGTCACGGTCCCGTCCGTTGGTACCGCTCAAGCCTTTGCTCTTGAATTCCTCATCACCTTCAATCTCTTGTTTGTCGTCACCAGTGTTGCTACAGATACTCGAGCTGTTAGAGAGTTGGCCGGAATTGCAGTTGGAGCTACAGTGATGCTCAACATTCTTATTGCAGGGCCATCCACTGGTGGTTCCATGAACCCAGTGAGGACCTTAGGCCCTGCAGTGGCTGCTGGAAATTACAGAGAACTGTGGATATACTTGGTGGCTCCTACACTTGGGGCCATCGTTGGTGCCGGAACCTACACCGCCGTAAAGCACAAAGATGATGGAATTGATGTTCTGCCGGAGGAGAGGAGTTTCCATCAGTGA 753 51.66 MAQFEIVRVDSPKRSQILDVSLTRKVAAEFVGTFILIFGATAAPIVNQKYNSPMSLIGNAACSGIAVMIVIFSIGHISGAHLNPSLTIALATLRHFPLAHVPAYITAQVSASICASFALKGVFHPFMSGGVTVPSVGTAQAFALEFLITFNLLFVVTSVATDTRAVRELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAAGNYRELWIYLVAPTLGAIVGAGTYTAVKHKDDGIDVLPEERSFHQ 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 23246649 23250060 - MELO3C005817.2.1 Cme09g01911 338771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01911 250 Pfam Major intrinsic protein 20 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01911 250 Gene3D Glycerol uptake facilitator protein. 5 240 IPR023271 -
Cme09g01911 250 PANTHER AQUAPORIN NIP5-1-RELATED 17 240 - -
Cme09g01911 250 PANTHER AQUAPORIN NIP2-1 17 240 IPR034294 -
Cme09g01911 250 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Cme09g01911 250 SUPERFAMILY Aquaporin-like 18 234 IPR023271 -
Cme09g01911 250 PRINTS Major intrinsic protein family signature 24 43 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01911 250 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01911 250 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01911 250 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01911 250 PRINTS Major intrinsic protein family signature 175 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01911 250 PRINTS Major intrinsic protein family signature 212 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g01911 Cme-Chr9:23246649 Cme01g02717 Cme-Chr1:34410056 2.61E-33 dispersed
Cme09g01911 Cme-Chr9:23246649 Cme09g01912 Cme-Chr9:23251798 3.32E-136 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01911 K09874 - csv:101212485 446.047