Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01912 ATGCCGGAATCGGAAAGTGGAACGCCGGTAGCATCGGCGCCGGCGACGCCGGGGACGCCGGGAGGGCCGCTGTTTTCGGGGCTCCGAGTGGATTCTCTATCGTACGATCGGAAGTCAATGCCGAGGTGTAAGTGTTTGCCCGTGAATGCTCCCACGTGGGGCCAACCTCACACGTGCTTCACTGATTTCCCTGCTCCTGATGTCTCTCTCACTCGCAAGTTGGGAGCAGAATTTGTGGGGACATTCATCTTGATATTTGCTGCGACGGCAGGGCCCATTGTGAACCAAAAGTACAACGGCGTGGAGACTCTGATTGGAAACGCTGCATGCGCAGGGTTGGCGGTGATGATTGTAATTCTGTCGACGGGACACATTTCCGGTGCACACCTGAACCCATCACTCACCATTGCCTTTGCTGCCCTACGCCACTTTCCTTGGGTTCAAGTCCCTGCCTACATTGCCGCCCAAGTCTCTGCCTCCATTTGCGCCTCCTTCGCTCTCAAAGGGGTTTTTCACCCTTTCATGTCTGGTGGTGTCACCGTCCCCTCCGTCAGTACTGGCCAAGCCTTTGCTCTTGAATTTATCATCACTTTCAATCTCCTCTTTGTTGTCACTGCGGTTGCCACTGACACTCGTGCGGTAGGAGAATTAGCAGGAATTGCAGTCGGAGCTACAGTGATGCTTAATATTCTTGTCGCTGGGCCCTCAAGCGGTGGTTCGATGAACCCTGTTCGAACTTTGGGACCCGCCGTAGCTGCTGGAAATTACAGAGCATTGTGGGTTTATCTGGTGGCGCCGACGCTTGGTGCAATAATCGGCGCCGGAACTTACACCGCCGTCAAGCTGAGAGACGACGAAGTGGAAGCTCCATCACAGGTGAGGAGCTTCCGGCGTTGA 897 55.07 MPESESGTPVASAPATPGTPGGPLFSGLRVDSLSYDRKSMPRCKCLPVNAPTWGQPHTCFTDFPAPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYNGVETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSSGGSMNPVRTLGPAVAAGNYRALWVYLVAPTLGAIIGAGTYTAVKLRDDEVEAPSQVRSFRR 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 23251798 23256279 - MELO3C005818.2.1 Cme09g01912 338772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01912 298 MobiDBLite consensus disorder prediction 1 24 - -
Cme09g01912 298 Gene3D Glycerol uptake facilitator protein. 64 293 IPR023271 -
Cme09g01912 298 PANTHER AQUAPORIN NIP2-1 9 296 IPR034294 -
Cme09g01912 298 PANTHER AQUAPORIN NIP5-1 ISOFORM X1-RELATED 9 296 - -
Cme09g01912 298 Pfam Major intrinsic protein 68 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01912 298 ProSitePatterns MIP family signature. 129 137 IPR022357 -
Cme09g01912 298 SUPERFAMILY Aquaporin-like 69 287 IPR023271 -
Cme09g01912 298 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01912 298 PRINTS Major intrinsic protein family signature 111 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01912 298 PRINTS Major intrinsic protein family signature 148 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01912 298 PRINTS Major intrinsic protein family signature 192 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01912 298 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cme09g01912 298 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g02009 Cme-Chr7:25155942 Cme09g01912 Cme-Chr9:23251798 3.37E-121 dispersed
Cme08g00198 Cme-Chr8:1344229 Cme09g01912 Cme-Chr9:23251798 6.98E-72 dispersed
Cme09g01912 Cme-Chr9:23251798 Cme01g02717 Cme-Chr1:34410056 1.18E-29 dispersed
Cme09g01911 Cme-Chr9:23246649 Cme09g01912 Cme-Chr9:23251798 3.32E-136 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01912 K09874 - csv:101212651 565.074