Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01951 ATGGAGATAGATGGGCTATGTGTTATTTGCGCTGGTATTGGAATCGTCGAGGAGGATGACTACGGCAATCGGATTGGTTACTCCAAAAGCGAGTTCTGTTTGGATAATTTGAAGGATTTGCTTAGGTTCTTGAGGAGAGATGACCCGCAGACTCGCGATGTTTTTAAGCACGTTTGTAAATGGAACATTGTGGGTAAAGATTTGATACCCATTATTGAGTACTGTCAAGATGATCGTAATGCAGTCTTAAATGCAGTGAAGATTTTGGTGTTCCTCACAATGCCTATCGAACCCACGTCAAGTGACATTGCACAACAGATCGAGTATTTATGGGGATTGAAGTCTTTAATCACTTGCAGTAATGTTGTTGCCAATATTGTTTCACTTCTGGAGAGTCCACTGGAAAATCTGGATTGTGGAACGTTCTCAGAAGATGACTGGAAATTGTTGCAGTTGGTTATAACACTCTTCCGAAATGTTTTGGCTATTCAAGAAATCTCATTGCAGCAAAAGGCTGATGGATCAGCTTGTCAGTTAATATTGCTGAGAGACAAATTTTTGGAAGTTTTATTCCGGGAGAATGTTATGGACATAATATTGGTGATGACGCAGCACATTGATGGGTCTTGCAGCCATCTCCGTCAAGACAAATTAGTCTTTTTGGAAATATTTTATTACATATTTATGGGCCAAGAGCCTGAGTTAATCGCGAAAGTGCCTCAAAACAGCAGTGAGGAAAATGTAGAAACGGTATCTTCTGTCAATAGTCTGAAATCTATGATGGAGGAAGATAGAAGAAAGTTTTCTAGATTACAAAATTTGAACCGCCATTCTCAGTTTAGTGGAACTTTTACTCGGCAAACCTTGGATGGTTCAAAGTTAGTACTCAAAGGAAAACCATCTTTGAGTACTTCTACCAGCCTTAAACCACCTAAAGTTTGTAGAGGTCCAATTAAAAAAATTGCATGGGATCTTGGACGATTAACATCGAAAAACAGCAAACTTCTGCAGTTACTTCATGATTTTATCAACCAGTTTCTTTCGGGCGGCTACAATGCGCTGATGCAGTTGGTGCATGAAGATATTGAAAAGGAACATCATTCCATCCAGAACAACGATGTGGTGGTTTTTTTTCAGGTTGCACAGTTTGCTATTTCTTTCCAATATCACAAGTTTTCAACTTCAAAGATAATTGAAGATGAGACTGATGAGGCTCAAACGGAACATGCTGATTCCACATTTTTCCAAGGTAACATGTGCGGCCCAATAGCAGCAACAATGAACGAGGCAATGTTTCAATTAGTTGTTTCCAAATGGCGTTATGCATTTGAAGGCTTAAAGGAAACTAATGACTTTAAGTTTCTGTCTGCTGCTGGCTCTCTGATGAAAAATATGATTTGCATGCTAGATTTGGTACTAAAATTATTGCCAGAAGATTCAAAGGAACCTCAAACAGCTCGTATTCTACTTTACAAACTATTTTATGATCAGACAGATCAAGGGATGACTCAATTCCTCTTAAATTTGCTCAAGTCATTCAACACTCACAAACAACCCAAAAGTGATCTTGCAGATTTAGTTGAGATGGTCTACAAGGTCGTACAACTTATGGAGAACCTCCAAGCACGTGGAACACTTCGGGTTTCCAAAAAATCAAGGAGGGGAAGAAAGGCAAAGTCAGCAAATAATGGGGACAACAAACAGTCAGAAGATCAGGGAGCAGAGAATAAAACGGCCATAACCCATAATGAGCAATCAACAGATGTTGATGTTTGTGAAAATAGTAACTTAAAAACGAGTCCTAGTGGTAAAGAAGAGATATCTGTTACTGCTAATGCTGACGAACCTGAACCTTTAGACTTAAACTCGGGAGGTTTTGAAGGCAGTATGCCACAGAGAGAGGACAAAAATTTGAATGATGGTTACAGCACAGCCGACTCTTCTAGTGATGAACAGAAAAATAGAATTGTGGAGGTTGATCTTAAAGTATCAAGTCTAGTGTCTACTTTTGCCAACAACAACATTATTCAGAAGATATGCTGGTTGCTTAAGTTTTACAAGAGCAATGCTACTAGTACAAACCATTACATAATATGCATTTTGCGGAAGATCACTGAGGATTTAGAGCTTTCCCCAATGCTGTACCAGTTATCCGTCCTTCCCACGTTTTATGATATTCTATCTGAACAGAAGTCAAGTCCATGCAAGGAACATGCTACCATAGTTGATTTCCTGACGAGTCTGGTGAGAAAGATGCTACGGAAGATAAAGAATCAGCCACTCCTTTTTGTTGAAATTCTGTTTTGGAAGACCCGAAAAGAATGCCATTATATTGACGCTGAGTACTTAGTGCATGAGCTTGGCTGCTGGAAGAAAGGAAGTAGGGAGGAAAACTTTACAGGCGGTGATGAAAATGGCTCGTTGACAGGCCAGCATTGGACTCCCAGAAGCATAGCGGATGCACTTGGTGAAGATGAAGCTGATGTTGTGCTCACCAATAACGAGTTTGGATCTCATAGTGAAGCAAAGTCCGACGAAGTCAAGAAAGGCCTTGAATCTACCAACTTGGATGATGAGATGGACGGGAAAGAACACAATGAAAATGAGCTGTCTATGGACAATAAGCCCAAAAGGCTTCCTAAACGAAAAGGACTTGTTCTTGATGCGGCACTGGAGACTGAAATTAAAGATCTTTATGAGAAATTCAAGGAGGACAGGAACTGTAGCAAACTTATTGCGGAGAATCTTGATAATGATGTCAAAGTTTCGCCTGCCCAGGTTTCCAATAAGCTTAGACAGATGGGTTTGAAAGTTTTTCAAAGAAAGAAGAGGCAGTATGCTGATGAAGGCTTTTCTGCTATTTCTGAAAACCTTGAAGGAGAAAGCAACGGAGAAGAACTACGTAACTCAAATGTTTTCGGGAAAAGTTCATTGAATCAACCTTCGTACGTTCGATATGTCACAACTGGTCGGCTAACTAGAAAAAGAATTCTTGCTTTTGATAAAGAACACGAAGAGAAGATTAGAGCTTTATATGAGCAGTTTAAAGACCATAAGAGATGTAGTTCTATGATTGCAAATGCGCTGGATGCTGATAACAAATTCACTCCTGCCCAAATTTCCCGAAAACTCAAGCAGTTGGGTTTGTATATTTCTCGTAAGAGAAGGTCAAGTGATGGGGATCGTAATGAATCTGCTATTGATAAGGAATCTGAAAGTGATGATGAGACATTGCTCTCATTAATAAATAGGAAAAAAGGGAAGCATCTTCCAAAGTCAACTGAAACGCCCAGTTCCATCTCAACACAGAGCATACTAATTGATGAGGAATCTGAAGGTGTAGCTGTTGGAAGGTCCATGCAAATGGAAGATAGAAACCAAGCCAGAAGCTTGGACACTATGGGGGTTGGTGGACCGCCTTCAGATGATGTTGACTTGAATGACTTTACGGAAAATCAAGGTAAGGATGCTGAAGCTGGCCGTGTCAGTATGGATGATTTGATGCAAAAGGCCATGGAAGATGAGTTTGCTGATTCAGACAATGAAGTGTCTCCCAGTGTGTATCGTACAACGGGAAGAAAGTTTAGGATTGTTGATCTTGAGGATGAAGAATGA 3615 40.06 MEIDGLCVICAGIGIVEEDDYGNRIGYSKSEFCLDNLKDLLRFLRRDDPQTRDVFKHVCKWNIVGKDLIPIIEYCQDDRNAVLNAVKILVFLTMPIEPTSSDIAQQIEYLWGLKSLITCSNVVANIVSLLESPLENLDCGTFSEDDWKLLQLVITLFRNVLAIQEISLQQKADGSACQLILLRDKFLEVLFRENVMDIILVMTQHIDGSCSHLRQDKLVFLEIFYYIFMGQEPELIAKVPQNSSEENVETVSSVNSLKSMMEEDRRKFSRLQNLNRHSQFSGTFTRQTLDGSKLVLKGKPSLSTSTSLKPPKVCRGPIKKIAWDLGRLTSKNSKLLQLLHDFINQFLSGGYNALMQLVHEDIEKEHHSIQNNDVVVFFQVAQFAISFQYHKFSTSKIIEDETDEAQTEHADSTFFQGNMCGPIAATMNEAMFQLVVSKWRYAFEGLKETNDFKFLSAAGSLMKNMICMLDLVLKLLPEDSKEPQTARILLYKLFYDQTDQGMTQFLLNLLKSFNTHKQPKSDLADLVEMVYKVVQLMENLQARGTLRVSKKSRRGRKAKSANNGDNKQSEDQGAENKTAITHNEQSTDVDVCENSNLKTSPSGKEEISVTANADEPEPLDLNSGGFEGSMPQREDKNLNDGYSTADSSSDEQKNRIVEVDLKVSSLVSTFANNNIIQKICWLLKFYKSNATSTNHYIICILRKITEDLELSPMLYQLSVLPTFYDILSEQKSSPCKEHATIVDFLTSLVRKMLRKIKNQPLLFVEILFWKTRKECHYIDAEYLVHELGCWKKGSREENFTGGDENGSLTGQHWTPRSIADALGEDEADVVLTNNEFGSHSEAKSDEVKKGLESTNLDDEMDGKEHNENELSMDNKPKRLPKRKGLVLDAALETEIKDLYEKFKEDRNCSKLIAENLDNDVKVSPAQVSNKLRQMGLKVFQRKKRQYADEGFSAISENLEGESNGEELRNSNVFGKSSLNQPSYVRYVTTGRLTRKRILAFDKEHEEKIRALYEQFKDHKRCSSMIANALDADNKFTPAQISRKLKQLGLYISRKRRSSDGDRNESAIDKESESDDETLLSLINRKKGKHLPKSTETPSSISTQSILIDEESEGVAVGRSMQMEDRNQARSLDTMGVGGPPSDDVDLNDFTENQGKDAEAGRVSMDDLMQKAMEDEFADSDNEVSPSVYRTTGRKFRIVDLEDEE 1204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 23496885 23506404 - MELO3C005855.2.1 Cme09g01951 338811

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01951 1204 MobiDBLite consensus disorder prediction 565 607 - -
Cme09g01951 1204 MobiDBLite consensus disorder prediction 1148 1163 - -
Cme09g01951 1204 PANTHER PROTEIN TIMELESS HOMOLOG 3 1150 - -
Cme09g01951 1204 MobiDBLite consensus disorder prediction 636 650 - -
Cme09g01951 1204 MobiDBLite consensus disorder prediction 1130 1163 - -
Cme09g01951 1204 MobiDBLite consensus disorder prediction 839 877 - -
Cme09g01951 1204 MobiDBLite consensus disorder prediction 1055 1075 - -
Cme09g01951 1204 PANTHER TIMEOUT/TIMELESS-2 3 1150 IPR044998 -
Cme09g01951 1204 Pfam Timeless protein 27 285 IPR006906 -
Cme09g01951 1204 MobiDBLite consensus disorder prediction 835 877 - -
Cme09g01951 1204 MobiDBLite consensus disorder prediction 545 651 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01951 K03155 TIMELESS; timeless - csv:101218315 2250.71
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g835 . . . . . . . . . . . . . . . Cpe05g00623 . . . . . . . . . . . . . . . . . . . . . Chy09g01406 . . . . . . . . . . Cmo02g01116 . . . . . . . . . . . . . . . . . . . . . . . . Cme09g01951
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011825 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 30