Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme09g01959 ATGGGCTTCAAAAGGGACCTGGAGCATGTCGTCTTCATTTTCTCTGCAGTTTTCTGGTTTGCAGCAACTTTTTCTCCGGTCATGTCAGAGCCGATCAAAGACAAGGAAGCTTTGCTTGATTTTATTAACAAGATGGATCACTCACACGCGATCAATTGGAAAAAGAGCACTGCTTTGTGCAAAGAGTGGATTGGAGTTCAATGCAACAATGCCGAATCTCAAGTTGTAGGTTTGCGATTGGCTGAAGTTGGCTTACATGGTTCGATCCCAGTGAACACTCTTGGTCGACTATCGGGACTTGAAACTCTGAGCCTAGTATCAAATTACATATCAGGGTCTTTCCCTTTTGACTTCCAAAAACTGAGAAATCTCAACTCACTTTACTTGGAGAACAACAGGTTTTCTGGTCCATTGCCATTGGATTTCTCAGTATGGAAGAATCTCAGCATCATTGATTTGTCCAACAATGCATTCAATGGGAGCATCCCTCCCTCAATATCAAACATGACGCATCTAACAACATTAAACCTCGCCAATAACTCACTCTCTGGTGAGATTCCAGACCTCCACCTTCCTAGTTTGCAGGACTTGGATCTTTCGAACAACTTCCTCACAGGGAATGTCCCTGATTCCCTTCAAAGATTTCCAAGTCGGGCATTCTCCGGTAACAACCTTGTCCCCAAGATTAAGAATGCCGTTCCTCCAGTTCGTCCTGGACAGTCGCCCAATGCAAAGCCATCAAAGAAAGGTACAACAACAATTGGTGAAGCAGCAATTTTAGGCATTATAATTGGAGGTTCTGCAATGGGGTTAGCTATAGCAGTCATTTTGGTGGTTATGTGCTGCTCAAACAGAAAAGTGAAAAACAATGCCTCATCGAAGCTGGACAAACAAGATTTGTTTGTAAAGAAAAAGGGATCTGAGACACAAAGCAACAATCTCAAGTTTTTTCAAAGTCAGAGCCTTGAGTTTGACTTGGAGGACTTGTTGAGGGCGTCTTCCGAGGTGCTCGGGAAGGGGACGTCTGGGACGACATATAAGGCAACATTAGAAGACGGGAATGCTGTGGCAGTGAAGAGGTTGAAGGAAGTGAGTGTTTCAAAGAAAGAATTTGAGCAGCAGATGGAAGTGGTAGGGAGCATTGAACATGAGAATGTGTGTGGTTTAAGGGCATATTATTATTCAAAGGATGAGAAACTCATGGTCTTCGACTTTTACCAACGTGGAAGTGTCTCTGCAATGTTGCATGTTGCAAGAGAGAAAGGGCAGTCTCCACTTGACTGGGAAACACGACTCCGTATCGCCATTGGCGCCGCCAGAGGAGTCGCTCGCATCCATTCACAAAACTGCGGCAAACTTCTTGTCCATGGAAACATCAAGGCATCAAACGTATTTCTAAACTCCCACGGCTACGGTTGCGTCTCCGACGCCGGTGTCGCTGCTCTCATGAACCTCATGACCCCACCAGCCACCAGATCCGCCGGATACCGTGCTCCCGAACTCAAGGACTCTCGCAAAGCATCTCAAGCCTCTGATACTTACAGCTTCGGCGTCGTGCTTCTCGAGCTCCTCACCGGAAAATTTCCACTGCATACGAAGGGAGGTAACGGTGGAGATCAGATAATCCACCTGGTGCGGTGGGTGAACGCGGTTGTCCGAGAGGAGTGGACGGCGGAGGTGTTCGATGTGGAGCTTTTGAGGTATCCGAACATAGAGGAGGAGATGTTAGAGACGTTGCAAATTGCGCTATCTTGTGTAGGAAGAGTTCCGGATGATCGGCCGGCAATGGCGGATGTTGCGGCTCGTTTGGAGGGAGTTCGCCGGGTGAGCGTAGGAAGTTTACCACCGGTGCTGCCGCCGGCGTTGGAACGCGGAGCGGAGGAGTTGATCCAAATTCAGGTGAACGTGGGTGAGGGTGAGGGTGAGGGTGGAGTTCCGTCGAGATCGAATTGA 1953 47.98 MGFKRDLEHVVFIFSAVFWFAATFSPVMSEPIKDKEALLDFINKMDHSHAINWKKSTALCKEWIGVQCNNAESQVVGLRLAEVGLHGSIPVNTLGRLSGLETLSLVSNYISGSFPFDFQKLRNLNSLYLENNRFSGPLPLDFSVWKNLSIIDLSNNAFNGSIPPSISNMTHLTTLNLANNSLSGEIPDLHLPSLQDLDLSNNFLTGNVPDSLQRFPSRAFSGNNLVPKIKNAVPPVRPGQSPNAKPSKKGTTTIGEAAILGIIIGGSAMGLAIAVILVVMCCSNRKVKNNASSKLDKQDLFVKKKGSETQSNNLKFFQSQSLEFDLEDLLRASSEVLGKGTSGTTYKATLEDGNAVAVKRLKEVSVSKKEFEQQMEVVGSIEHENVCGLRAYYYSKDEKLMVFDFYQRGSVSAMLHVAREKGQSPLDWETRLRIAIGAARGVARIHSQNCGKLLVHGNIKASNVFLNSHGYGCVSDAGVAALMNLMTPPATRSAGYRAPELKDSRKASQASDTYSFGVVLLELLTGKFPLHTKGGNGGDQIIHLVRWVNAVVREEWTAEVFDVELLRYPNIEEEMLETLQIALSCVGRVPDDRPAMADVAARLEGVRRVSVGSLPPVLPPALERGAEELIQIQVNVGEGEGEGGVPSRSN 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 23541961 23546170 + MELO3C005864.2.1 Cme09g01959 338819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme09g01959 650 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Cme09g01959 650 MobiDBLite consensus disorder prediction 231 250 - -
Cme09g01959 650 Pfam Leucine Rich Repeat 193 214 IPR001611 GO:0005515
Cme09g01959 650 Pfam Protein kinase domain 334 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g01959 650 SUPERFAMILY L domain-like 49 215 - -
Cme09g01959 650 Gene3D Phosphorylase Kinase; domain 1 297 405 - -
Cme09g01959 650 SUPERFAMILY Protein kinase-like (PK-like) 335 621 IPR011009 -
Cme09g01959 650 ProSiteProfiles Protein kinase domain profile. 331 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme09g01959 650 PANTHER OS05G0588300 PROTEIN 23 609 - -
Cme09g01959 650 PANTHER LRR RECEPTOR-LIKE KINASE 23 609 - -
Cme09g01959 650 Gene3D Transferase(Phosphotransferase) domain 1 407 611 - -
Cme09g01959 650 Gene3D Ribonuclease Inhibitor 33 145 IPR032675 -
Cme09g01959 650 ProSiteProfiles Leucine-rich repeat profile. 171 192 IPR001611 GO:0005515
Cme09g01959 650 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Cme09g01959 650 Gene3D Ribonuclease Inhibitor 146 234 IPR032675 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme06g01065 Cme09g01959 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00941 Cme-Chr1:10904398 Cme09g01959 Cme-Chr9:23541961 3.73E-69 dispersed
Cme09g01821 Cme-Chr9:22530090 Cme09g01959 Cme-Chr9:23541961 0 dispersed
Cme09g01959 Cme-Chr9:23541961 Cme11g01678 Cme-Chr11:24777222 2.10E-169 dispersed
Cme06g01065 Cme-Chr6:7781833 Cme09g01959 Cme-Chr9:23541961 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65179 PF00069 Pkinase 5.60E-31 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme09g01959 - - csv:101219980 1157.13