Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme10g00006 | ATGGATCAACTTACCAAAGACTTCGACAAGGAAATACCCAACATGGATAATTCTAAGAGAGAAGAAGAAGAAGACGACCCAGACGAGGATCAAGAAGATGAACAAGACGACTGGGACGATTGGAATGCAGACGAAGAAGGCGAAGAAGCATTTGATTCGAACTTCCTGTGTCTGTTCTGCAACTCAAAGTACAACGACTGCAATATGCTGTTCAACCATTGCAACTCAGTTCACTATTTCGATTTCCACAGCATCAGAAGGAATCTGGGTTTAGATTTTTATGGTTCTTTCAAAATTATCAACTACGTACGATCTCAGGTTGCAGAAAATAGGTGCTGGAGCTGTGGTCTCTCGTGTCAATCAAACCTGGATTTACAGCACCATTTACACAAAATTTTAAATCTCAATGACATAAAGGCTCTTTGGGACGATGATAAATATCTAAAACCCTTCAAGCAAAATGATCCCCTTCTGTACAGTTTTGCAGAAGACGAAGAGGATGATGATGAAACAGCTAGAGAAAATCTTCCATTTCATGCAAACCAAAACCAAAATAATGGAATGGAAGATTGTAGTTCTGCTTCACATGGTTATTTGAATGCTGCACGCAGGTTAGAGGCCAAGATTGAGAATACTGTGGAAACCACGGAAACCTTGGGTTTGAAATATGACGTGCAGGAAGACAACCAATTAAAAATAGCCAGACAAATTTTTGATAGAAATGACATAAAAAATGCAAATGAAAATTACTTCGGTTCATATGGCTCTTTTGCCATACACAGAGAGATGTTAAGCGACAAGGTTAGAATGGAAGCTTATATGAAGGCTATTTTGGAAAACCCATCTCTCTTCCAGAATGCAGCTGTGATGGATGTAGGCTGTGGAACAGGCATACTTAGTCTCTTTGCTGCAAAAGCAGGTGCATCAAGAGTTATTGCAGTTGAAGCGAGTGAAAAGATGGCAGCAGTGGCCACTCAAATTGCAGAAGACAATGGCCTCTGGCGGAACAGGAAACAAACTAGAGATTGTGGCATGTCAAGTGGGATTATAGAAGTGATTCATGGTATGGTAGAAGAACTCGATAAGAACATAGAGATTCAGCCTCATAGTGTTGACGTATTATTGAGTGAATGGATGGGCTATTGCTTGTTGTATGAGTCAATGCTCAGCTCAGTTCTCTTTGCAAGGGATCGTTGGTTGAAACCTGGAGGTGCAATATTACCAGATACTGCCACTATTCTTGTTGCAGGATTTGGAGTTGGTGGAACTAGTCTTCCATTTTGGGAAAACGTGTACGGTTTCAGAATGTCTTGTGTTGGGAAGGAACTTGTAAGGGATGCTGCCAAAGCCCCCATCGTGGACATTGTGGATGCTAATGATTTAGTAACTAGTCCTGCAATTCTCCATACTTTCGATCTAGCAACTATGCGTCTTGATGAAGTAGACTTCACTGCGATGACCGAGTTGGAACCAAATTTACATAATTCTTCAAACAACTCAAATAGTGTTGAAGCTGAAGCATCTTGGTGTCACGGAGTTGTCTTATGGTTTGAAACTGGTTTCACAAGCAGATTTTGCAAGGAATCACCGGCAGTTCTGTCTTCATCTCCCTACACTCCCAAAACTCACTGGTCTCAAACCATACTAACCTTCAGAGAACCAATTGCTGTAGCATCTAGAAAGTCGGTAACCAATGTATCAGCTCCAGTAGGCAGCCATGCCTGCCCTGCTGTCAAAGTTCATTTGCGGCTTAGCATTGCCCGTGCGCCCGAACATCGAAGCATTGACATTTCACTAGAGACTACTGGGATTGCTGGTGATGGTAGGAAGCGCCACTGGCCGGTACAACTGTTCACACTAAGATAG | 1866 | 42.18 | MDQLTKDFDKEIPNMDNSKREEEEDDPDEDQEDEQDDWDDWNADEEGEEAFDSNFLCLFCNSKYNDCNMLFNHCNSVHYFDFHSIRRNLGLDFYGSFKIINYVRSQVAENRCWSCGLSCQSNLDLQHHLHKILNLNDIKALWDDDKYLKPFKQNDPLLYSFAEDEEDDDETARENLPFHANQNQNNGMEDCSSASHGYLNAARRLEAKIENTVETTETLGLKYDVQEDNQLKIARQIFDRNDIKNANENYFGSYGSFAIHREMLSDKVRMEAYMKAILENPSLFQNAAVMDVGCGTGILSLFAAKAGASRVIAVEASEKMAAVATQIAEDNGLWRNRKQTRDCGMSSGIIEVIHGMVEELDKNIEIQPHSVDVLLSEWMGYCLLYESMLSSVLFARDRWLKPGGAILPDTATILVAGFGVGGTSLPFWENVYGFRMSCVGKELVRDAAKAPIVDIVDANDLVTSPAILHTFDLATMRLDEVDFTAMTELEPNLHNSSNNSNSVEAEASWCHGVVLWFETGFTSRFCKESPAVLSSSPYTPKTHWSQTILTFREPIAVASRKSVTNVSAPVGSHACPAVKVHLRLSIARAPEHRSIDISLETTGIAGDGRKRHWPVQLFTLR | 621 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 48306 | 59477 | - | MELO3C012491.2.1 | Cme10g00006 | 338892 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme10g00006 | 621 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
Cme10g00006 | 621 | SUPERFAMILY | beta-beta-alpha zinc fingers | 33 | 172 | IPR036236 | - | |
Cme10g00006 | 621 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cme10g00006 | 621 | MobiDBLite | consensus disorder prediction | 21 | 40 | - | - | |
Cme10g00006 | 621 | Pfam | C2H2 type zinc-finger (2 copies) | 57 | 131 | IPR041661 | - | |
Cme10g00006 | 621 | ProSiteProfiles | SAM-dependent methyltransferase PRMT-type domain profile. | 247 | 579 | IPR025799 | GO:0016274|GO:0018216 | |
Cme10g00006 | 621 | CDD | AdoMet_MTases | 289 | 407 | - | - | |
Cme10g00006 | 621 | Gene3D | - | 411 | 612 | - | - | |
Cme10g00006 | 621 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 253 | 564 | IPR029063 | - | |
Cme10g00006 | 621 | Gene3D | Vaccinia Virus protein VP39 | 237 | 408 | IPR029063 | - | |
Cme10g00006 | 621 | PANTHER | PROTEIN ARGININE N-METHYLTRANSFERASE | 25 | 619 | IPR025799 | GO:0016274|GO:0018216 | |
Cme10g00006 | 621 | Pfam | Methyltransferase domain | 289 | 404 | IPR041698 | - | |
Cme10g00006 | 621 | PANTHER | PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED | 25 | 619 | - | - | |
Cme10g00006 | 621 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 57 | 78 | IPR013087 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme09g01099 | Cme-Chr9:15585404 | Cme10g00006 | Cme-Chr10:48306 | 8.32E-52 | dispersed | |
Cme09g01617 | Cme-Chr9:20939857 | Cme10g00006 | Cme-Chr10:48306 | 7.88E-07 | dispersed | |
Cme10g00006 | Cme-Chr10:48306 | Cme11g02009 | Cme-Chr11:27983536 | 4.45E-38 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme10g00006 | K11436 | - | csv:101215999 | 1146.34 |