Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme10g00093 | ATGGGTCCATCGGAGAAAGATATGGTGGTGAATCAACTGCCGGAGTCCGTGAGGGAGATTTCAGGGCTTCCTGAGTGTAACGGCATCTGTAAGAAGATGTATGGGGACCTGATTCGAAGAGTCAAATTATTGAGCCCTCTGTTTGAAGAATTAAGAGATGGGGAAGAAGAAGTTGAGTTGGATGTTCTTAAGAGCTTGGAGTTGCTCAAAATTGCGTTGGATTCTGCTATTGAGCTTCTTAAGTCGGTCAGCCGAGGTAGCAAGCTATTTCAGGCTTCGCAGTCGGAAATGATTGGCCTTGAGTTTCATCATATGACAGAAGATATTGAAGCAGCGCTCAGCAAGCTTCCCATTGACAAGCTTGGGATCTCGGACGAGGTTCGGGAACAGACTGAACTTGTTCATGCGCAATTCAAACGAGCAAAAGAGCGAGTAAGTTTAGCTGATACGCAATTAGACAAGGATTTAGCCATATTACAAGAAGAAAAAGATCCCGACCCTGCAGTATTGAAGAGACTTTCTGAAAAGCTGCATCTTCGAACTCTAAACGATCTGAAGAAAGAGTCACTAGCGATCCATGAGTTAGTGATCTCGAGTGATGGAGACCCTGAGGATGTTTTTGGTAAAATGTCGTCCATTTTAAAGAAGTTGAAGGATTTTGTACAATCAGAAAACCCGGAAGTTGAAACTTCTCAAGACGAAAAAACTACTACCATTAAACACAGATCTCCTGTCATCCCCGACGATTTCAGATGCCCCATATCTCTTGAATTGATGAGGGATCCGGTTATCGTTTCCACCGGGCAGACATATGAGAGATCTTGCATTCAGAAATGGTTGGATGCAGGGCACAAAACTTGTCCAAAATCTCAGCAAGCTTTACTACATACAGCCTTAACACCAAATTACGTTTTGAAGAGTCTAATTGCTTTGTGGTGCGAGAACAATGGTGTTGAACTGCCAAAGAAGCAAGGTAGCTGTAGAAACAAGAAAGCCGGAAACAATGTTTCGGACTGTGATCGGTCAGCCATCGATGCGTTACTAGTAAATTTGGTAAATGGATCTCCAGAACAAAAAAGATCAGCTGCAGGCGAGCTCCGGTTACTAGCGAAGAGGAATTCGGATAACAGAATTTGTATTGCTGAGGCAGGAGCTATTCCATTCCTTGTTGAACTATTATCCTCGAATGACACTAGGACCCAGGAGCATGCAGTTACGGCGTTATTGAATCTTTCAATCAACGACGGTAACAAAAGAACCATTGTCGACTTACGAGCCATACCTGCCGTAGTAGAAGTGTTGAGAAATGGCAGTATGGAGGCAAGGGAAAATGCAGCTGCAACGCTTTTCAGTCTATCCGTAATTGACGAGAACAAGGTTGCAATCGGAGCAGCCGGGGCAATTCCTGCCCTTATTAGTTTGCTTCGAGAAGGTACGCCAAGAGGAAAGAAAGATGCTGCCACTGCTATTTTCAATCTATCAATATATCAGGGAAACAAAGCTAGAGCAATAAGAGCAGGAATTGTGAATCCACTTATGGGATTTCTAAAAGATGCTGGAGGTGGAATGGTGGATGAAGCTCTAGCCATTCTAGCAATACTTGCAACTCACCATGAAGGAAAAACGGCAATAGGGGAAGCTGAGCCGATGACGATTCTGTTGGAGTTCATCAGAACAGGTTCTCCACGAAACCGGGAGAATGCTGCTGCTGTGCTGTGGTCGCTTTGTAGTACGGATTTCGAGCAGTTGAAGCTAGCTAGAGAACATGGGGCAGAAGAGGCATTAAAGGAAGTATCTGAGAATGGCACAGAGAGAGCAAAGAGAAAAGCAGGAAGCATTTTAGAACTGTTTCAACGTTTTGATAGACCATCACCTAATCTATAA | 1884 | 44.0 | MGPSEKDMVVNQLPESVREISGLPECNGICKKMYGDLIRRVKLLSPLFEELRDGEEEVELDVLKSLELLKIALDSAIELLKSVSRGSKLFQASQSEMIGLEFHHMTEDIEAALSKLPIDKLGISDEVREQTELVHAQFKRAKERVSLADTQLDKDLAILQEEKDPDPAVLKRLSEKLHLRTLNDLKKESLAIHELVISSDGDPEDVFGKMSSILKKLKDFVQSENPEVETSQDEKTTTIKHRSPVIPDDFRCPISLELMRDPVIVSTGQTYERSCIQKWLDAGHKTCPKSQQALLHTALTPNYVLKSLIALWCENNGVELPKKQGSCRNKKAGNNVSDCDRSAIDALLVNLVNGSPEQKRSAAGELRLLAKRNSDNRICIAEAGAIPFLVELLSSNDTRTQEHAVTALLNLSINDGNKRTIVDLRAIPAVVEVLRNGSMEARENAAATLFSLSVIDENKVAIGAAGAIPALISLLREGTPRGKKDAATAIFNLSIYQGNKARAIRAGIVNPLMGFLKDAGGGMVDEALAILAILATHHEGKTAIGEAEPMTILLEFIRTGSPRNRENAAAVLWSLCSTDFEQLKLAREHGAEEALKEVSENGTERAKRKAGSILELFQRFDRPSPNL | 627 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 668933 | 672526 | + | MELO3C012406.2.1 | Cme10g00093 | 338979 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme10g00093 | 627 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 244 | 319 | IPR013083 | - | |
Cme10g00093 | 627 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 14 | 9 | 620 | - | - | |
Cme10g00093 | 627 | CDD | RING-Ubox_PUB | 250 | 292 | IPR045210 | - | |
Cme10g00093 | 627 | PANTHER | U BOX DOMAIN-CONTAINING | 9 | 620 | - | - | |
Cme10g00093 | 627 | Pfam | Armadillo/beta-catenin-like repeat | 456 | 494 | IPR000225 | GO:0005515 | |
Cme10g00093 | 627 | Pfam | Armadillo/beta-catenin-like repeat | 414 | 453 | IPR000225 | GO:0005515 | |
Cme10g00093 | 627 | Pfam | Armadillo/beta-catenin-like repeat | 373 | 412 | IPR000225 | GO:0005515 | |
Cme10g00093 | 627 | Gene3D | - | 418 | 520 | IPR011989 | - | |
Cme10g00093 | 627 | SUPERFAMILY | RING/U-box | 244 | 321 | - | - | |
Cme10g00093 | 627 | SMART | Ubox_2 | 249 | 312 | IPR003613 | GO:0004842|GO:0016567 | |
Cme10g00093 | 627 | Gene3D | - | 9 | 119 | IPR036537 | GO:0007166 | |
Cme10g00093 | 627 | Gene3D | - | 521 | 624 | IPR011989 | - | |
Cme10g00093 | 627 | SMART | arm_5 | 455 | 495 | IPR000225 | GO:0005515 | |
Cme10g00093 | 627 | SMART | arm_5 | 414 | 454 | IPR000225 | GO:0005515 | |
Cme10g00093 | 627 | SMART | arm_5 | 373 | 413 | IPR000225 | GO:0005515 | |
Cme10g00093 | 627 | SMART | arm_5 | 537 | 577 | IPR000225 | GO:0005515 | |
Cme10g00093 | 627 | SMART | arm_5 | 496 | 536 | IPR000225 | GO:0005515 | |
Cme10g00093 | 627 | Pfam | U-box domain | 246 | 316 | IPR003613 | GO:0004842|GO:0016567 | |
Cme10g00093 | 627 | SUPERFAMILY | ARM repeat | 340 | 616 | IPR016024 | - | |
Cme10g00093 | 627 | Gene3D | - | 336 | 417 | IPR011989 | - | |
Cme10g00093 | 627 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 425 | 467 | IPR000225 | GO:0005515 | |
Cme10g00093 | 627 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 384 | 426 | IPR000225 | GO:0005515 | |
Cme10g00093 | 627 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 466 | 508 | IPR000225 | GO:0005515 | |
Cme10g00093 | 627 | ProSiteProfiles | U-box domain profile. | 245 | 319 | IPR003613 | GO:0004842|GO:0016567 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme10g00093 | Cme-Chr10:668933 | Cme12g00199 | Cme-Chr12:2053105 | 0 | dispersed | |
Cme10g00093 | Cme-Chr10:668933 | Cme11g01284 | Cme-Chr11:19590109 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme10g00093 | - | - | csv:101221065 | 1165.6 |