Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00102 ATGGTGGCCGGCGGAGGAATCTCCGGATGCTCCGACATAGGTAGCATCGCGGTCCACGTCATCACCGGACGGTGGTTCGTGGTGTTTGCTTCACTCCTCATCATGGCGGCGGCCGGAGCAACGTACATGTTCGGCTTGTACTCGAGCGATATTAAATCGGTTTTGGGTTACGATCAAACAACGTTAAATTTGTTGAGTTTTTTCAAGGATTTGGGTGCAAACGTCGGCGTTTTATCTGGACTTATTAACGAGGTTACGCCGCCGTGGGTGGTTCTATCCATCGGCGCCGTTTTGAACTTCTTTGGTTACTTTATGATTTGGCTTGCCGTCACTCGTCGAATCTCCACCCCTAAAGTTTGGCAAATGTGTCTCTATATTTGTATTGGAGCCAATTCTCAATCCTTTGCTAATACAGGTTCTCTCGTCACTTGTGTTAAGAACTTCCCTGAAAGCCGCGGAGTCGTTCTTGGTATCTTGAAGGGATACGTCGGGCTGAGCGGCGCCATTATCACACAACTCTTCCACGCATTTTACGGCAACGACACCAAATCCTTAATTCTCCTCATCGGATGGCTTCCCGCTGCCATTTCCTTCGCATCTTTACGCACAATACGTATCATGAAAGTCATCCGCCAACCAAACGAGCTTAAAGTCTTCTACAACTTCCTCTACATTTCTCTTGCCCTCGCCGGATTCCTAATGCTAATGATCATTGTAGAAAGCAAAAAAGAGTTCAATCAAAACGAATACGGTGGCAGCGCCGCCGTCGTCCTCCTCCTACTTTTCCTCCCACTTTCTGTCGTCATCATCGAAGAATACAATCTTTGGAAACTCAAAACTGCTCTCGTTAAATCCCCAAATCCGTCTGTTCAAATCGTAACAGAGAAACTCCCAAAAACAGAGCATCCAAAACAATTAGAGCAAAAAGAACCATCTTGTTGGACAACAATTTTCAACCCACCACAACGTGGCGAGGATTTCACAATTCTTCAAGCTCTCTTCAGCTTCGACATGCTGATTCTATTCATCGCTGCAATCTGCGGTGTCGGTGGAACGTTAACGGCGATTGACAATTTGGGTCAAATCGGAATGTCTTTGGGATACCCAAAAAGAAGCATTAGCACATTTGTAACATTAGTCAGCATTTGGAATTACCTCGGCCGAGTTGCCTCCGGTTTCATCTCTGAAATTGTTTTGACAAAATACAAATTCCCTCGTCCTTTAATTCTCTCTCTAACCCTTCTTTTGTCCTGTGTCGGCCATTTGATAATAGCATTTGACGTCCCAAATGGGCTATACGTTGCTTCCATCGTAATCGGATTCTGCTTTGGAGCACAATGGCCGTTGATTTTCGCCATAATTTCAGAGCTTTTTGGGTTGAAATATTACTCAACGCTTTACAATTTCGGGTCAGTGGCGAGTCCAATTGGGCTATATATTCTGAATGTGAAAGTGGCTGGGAATTTCTACGACCGAGAAGCAGAGAAGCAGCTCAGTGCAAAAGGGATTATACGAAAAGCAGGGGAAGAATTAAAGTGCTTTGGAGGGGAATGCTTTAAGCTTTCATTCATTGTAATCACAGCTGTTACTTTATTGGGTATGTTAGTTTCATTGGTTTTAGTGATTAGAACAAGAAGTTTCTACAAAAGTGATATTTATAAGAAGTTTAGAGATGAAGCTGAAACAAAAGAGGTAGCCGGAAATGCGGTTATAGAGGTCGCCGGTGTACCGGAAGAGAGAAGAAAATGA 1749 44.25 MVAGGGISGCSDIGSIAVHVITGRWFVVFASLLIMAAAGATYMFGLYSSDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAVLNFFGYFMIWLAVTRRISTPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLFHAFYGNDTKSLILLIGWLPAAISFASLRTIRIMKVIRQPNELKVFYNFLYISLALAGFLMLMIIVESKKEFNQNEYGGSAAVVLLLLFLPLSVVIIEEYNLWKLKTALVKSPNPSVQIVTEKLPKTEHPKQLEQKEPSCWTTIFNPPQRGEDFTILQALFSFDMLILFIAAICGVGGTLTAIDNLGQIGMSLGYPKRSISTFVTLVSIWNYLGRVASGFISEIVLTKYKFPRPLILSLTLLLSCVGHLIIAFDVPNGLYVASIVIGFCFGAQWPLIFAIISELFGLKYYSTLYNFGSVASPIGLYILNVKVAGNFYDREAEKQLSAKGIIRKAGEELKCFGGECFKLSFIVITAVTLLGMLVSLVLVIRTRSFYKSDIYKKFRDEAETKEVAGNAVIEVAGVPEERRK 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 714269 716855 + MELO3C012398.2.1 Cme10g00102 338988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00102 582 Pfam Nodulin-like 24 269 IPR010658 -
Cme10g00102 582 SUPERFAMILY MFS general substrate transporter 24 546 IPR036259 -
Cme10g00102 582 CDD MFS_Mch1p_like 23 534 - -
Cme10g00102 582 Gene3D MFS general substrate transporter like domains 333 549 IPR036259 -
Cme10g00102 582 PANTHER MFS TRANSPORTER 9 566 - -
Cme10g00102 582 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 566 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02496 Cme-Chr4:31347417 Cme10g00102 Cme-Chr10:714269 1.70E-144 dispersed
Cme08g01273 Cme-Chr8:9204775 Cme10g00102 Cme-Chr10:714269 0 dispersed
Cme10g00102 Cme-Chr10:714269 Cme10g00105 Cme-Chr10:725073 0 dispersed
Cme12g00373 Cme-Chr12:5209699 Cme10g00102 Cme-Chr10:714269 2.36E-173 dispersed
Cme10g00102 Cme-Chr10:714269 Cme10g00104 Cme-Chr10:721428 4.58E-34 proximal
Cme08g01881 Cme-Chr8:22828895 Cme10g00102 Cme-Chr10:714269 0 transposed
Cme10g00102 Cme-Chr10:714269 Cme03g01238 Cme-Chr3:21970541 0 wgd
Cme10g00102 Cme-Chr10:714269 Cme04g02495 Cme-Chr4:31343385 9.63E-18 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00102 - - csv:101204293 1065.45