Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00105 ATGGAGGGATTCAGCACGAAATCCTTTACATTGAAACTAATCAAGGGGTCATGGTTCATGATGTTTGCATCGTTTCTAATCATGTCAATGGCGGGCATCCCGTACATGTTCGGTTTATACTCGAGCACCATAAAGACGGTATTAGGGTACGATCAAACAACCCTAAACTTCATAAGTTTCTTTAAAGATGTTGGTACGACGGTAGGTGTTGTAGCCGGGTTAATCAACGAAGTAACCCCACCATGGTCGATCCTAGCCATGGGAGCTCTACTCAACTTCTTCGGCTACTTCATGATCTGGCTATCCGTCTCCGAGAAAATCCCAACCCACGTTTGGTTAATGTGTCTCTACATCTGCGTGGGGGCGAACGCGACGACGTTTGCCAACACGGGGGCGCTAGTGACGTGTGTAAAGAACTACCCACAACGTCGGGGAGTGGTGATCGGTATATTGAAAGGGTACATGGGGTTGAGTGGGGCGATTGTGACGCAGTTGTATCATGCGATATATGGGAAAGATGAGAAGTCGCTGATACTGTTGTTGGGGTGGTTGCCGGCAGCAGTGTCGTTGGTGTTTTTGCCGACGGTGAGGCGGATGAAGGTGGAGCATGAGGAGGATGAGTTGAAGGTTTTTTATAGGTTTTTGTATATATCGTTGGGATTGGCTGGGTTTTTGATGATTATGATAATTTTGCAACAGAAGTTTAGTTTTGATAGAGGGGAATATGGAGGAAGTGCGGCGGTTGTTACTTTTCTATTGCTTTTGCCTATAGCGGTTGTTGTTGCTCAAGAGTTTAAGTCATGGCGCCGTTTGAATAAGCCGGCGGCTATTGAAAATGGCATTTCCCCTTCTCCGGGTTCACCACCATTAAAGAACACAACACCAATGTCACTTCTACCAAAGAAACAAAAACCTCAACAACAACAACCCATCAAAACGGAGTGGTGGAAAAATGTGTTCAATCCCCCACCAAGAGGAGACGATTGGACAATCCTTCAAGCTCTGTTCAGCTTCGACATGTTCCTCCTCTTCCTCGCCACTGCCTGCGGCGTCGGCGGCACACTCACTGCCATCGACAATCTCGGTCAGATCGGTCAATCCCAACATTACCCCAAAAAAAGCATCAGCACATTCGTTTCCCTCGTCAGTATCTGGAATTACCTCGGCCGAGTCATGGCCGGATTCCTCTCCGAACATTTACTCGTCAAATACAAATTCCCTCGTCCTTTAATGCTCACAATCGTTCTTCTTCTTTCCTGCATTGCCCATCTTTTAATCGCCTTCAATCCCTCTGGCGGTCTTTACATCGCCTCTATTTTGACCGGATTCTGTTACGGTGCTCAATGGCCTCTGCTTTTCGCCATTGTTTCGGAGATTTTTGGGTTGAAATATTACGCGACTCTGTATAATTTCGGGTCGGTGGCTAGCCCAGTTGGGCTTTATTTGTTGAATGTGAATGTGGCTGGGTATTTATACGATAAGGAAGCGAAGAAGCAGTTGGCTATGGCGGGGAGGATTAGAAAAACAGGGGAGGAGTTGGTTTGTAATGGGACAGTGTGTTTTAAGCTTTCGTTTGTGATTATTACGGCGGTGAGTTTGTTTGGGGCTTTGGTTTCTTTGGTTTTGGTGTTGAGGACTAAGAAGTTCTATAAGAGTGATATTTACAAAAAGTTTAAAGAAGCAGAGGAGGCGGCGGAGGAAGTGGAGGAGGAGGAGAACGACGACGGCCGTGTGGTTAGAAATGGTGGTGGTGGTTTGATGGAGGAGACGAAACATGGTCTTAGGCAATGA 1791 46.62 MEGFSTKSFTLKLIKGSWFMMFASFLIMSMAGIPYMFGLYSSTIKTVLGYDQTTLNFISFFKDVGTTVGVVAGLINEVTPPWSILAMGALLNFFGYFMIWLSVSEKIPTHVWLMCLYICVGANATTFANTGALVTCVKNYPQRRGVVIGILKGYMGLSGAIVTQLYHAIYGKDEKSLILLLGWLPAAVSLVFLPTVRRMKVEHEEDELKVFYRFLYISLGLAGFLMIMIILQQKFSFDRGEYGGSAAVVTFLLLLPIAVVVAQEFKSWRRLNKPAAIENGISPSPGSPPLKNTTPMSLLPKKQKPQQQQPIKTEWWKNVFNPPPRGDDWTILQALFSFDMFLLFLATACGVGGTLTAIDNLGQIGQSQHYPKKSISTFVSLVSIWNYLGRVMAGFLSEHLLVKYKFPRPLMLTIVLLLSCIAHLLIAFNPSGGLYIASILTGFCYGAQWPLLFAIVSEIFGLKYYATLYNFGSVASPVGLYLLNVNVAGYLYDKEAKKQLAMAGRIRKTGEELVCNGTVCFKLSFVIITAVSLFGALVSLVLVLRTKKFYKSDIYKKFKEAEEAAEEVEEEENDDGRVVRNGGGGLMEETKHGLRQ 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 725073 727309 + MELO3C012395.2.1 Cme10g00105 338991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00105 596 Gene3D MFS general substrate transporter like domains 330 591 IPR036259 -
Cme10g00105 596 MobiDBLite consensus disorder prediction 285 307 - -
Cme10g00105 596 MobiDBLite consensus disorder prediction 279 307 - -
Cme10g00105 596 Pfam Nodulin-like 18 261 IPR010658 -
Cme10g00105 596 Coils Coil 551 574 - -
Cme10g00105 596 SUPERFAMILY MFS general substrate transporter 247 551 IPR036259 -
Cme10g00105 596 MobiDBLite consensus disorder prediction 566 596 - -
Cme10g00105 596 CDD MFS_Mch1p_like 18 536 - -
Cme10g00105 596 PANTHER MFS TRANSPORTER 6 573 - -
Cme10g00105 596 Pfam Major Facilitator Superfamily 344 547 IPR011701 GO:0022857|GO:0055085
Cme10g00105 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 573 - -
Cme10g00105 596 SUPERFAMILY MFS general substrate transporter 11 203 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01238 Cme-Chr3:21970541 Cme10g00105 Cme-Chr10:725073 0 dispersed
Cme08g01881 Cme-Chr8:22828895 Cme10g00105 Cme-Chr10:725073 0 dispersed
Cme10g00102 Cme-Chr10:714269 Cme10g00105 Cme-Chr10:725073 0 dispersed
Cme10g00105 Cme-Chr10:725073 Cme12g00372 Cme-Chr12:5205738 0 dispersed
Cme10g00104 Cme-Chr10:721428 Cme10g00105 Cme-Chr10:725073 1.20E-24 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00105 - - csv:101205503 1110.13