Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00136 ATGGCTTCTTTCTCCCTCATTGCGTTTTTCCTCTCTGGTTTAATCTTCTTCCTCACAAGAAAACCCATAAGAAACCGACCCAATCTCCCTCCTGGACCGCCCGGTTGGCCCCTCGTCGGCAACCTCTTCCAAGTCGCCCTGTCCAAGAAACCCTTCTTCGAATACATTGAAGATCAACGCCGAATTTACGGCCCAATTTTTACCCTCAAAATGGGTCCTACAAGAATGGTTGTAGTGAGCGATTCGAATCTTGTTCACGAAGCACTAATTAAAAAAGGGGTGGTTTTTGCTGACCGTCCCAGAGAAAATCCTACCCGGATTATATTCAGCAGTAATAAATTTTCCGTCAATGCGGCGGTTTACGGCCCTATATGGCGGTCCCTCCGCCGCAACATGGTGGAAAATATGCTCAGCTCCGGCAAGGTTAAGGAGTTTCGAGACGTGAGAGAAAAAGCTATGGAAAAATTTGTGAAGCGGTTAAGACATGAAGCAGAGGATAATAACGGCGTCGTTTCGGTGCTTAAAAACGTGCGTTTTGCTGTGTTTTGGATCATGTTAACAATAGAAAGAAATCGAGCCACTCTCGTTCGGAAAAAACAAGTCGAATTCGTTGTTGAGTTAATTAATCGACGACGGCGGGCACTAGAGAATCCAGCTTCTGATGGCGATGCAACTCCGTTTTCATATCTGGACACGCTTTTCGATTTTAGAATCGACGGACGTAGCGGTGGAGGGAATTCGTCGGCAACAGAAGAAGAATTGGTGACACTTTGTTCGGAGTTTTTGAACGGCGGAACGGACACGACAGCGACAGTAATAGAGTGGGGAATGGCAGAATTGATAGCGAATGAGGAAATTCAAAGGAAGATAGTGGAAGAAATCAAAGAGACAGTTGGTGAGAGAAAAGTAGAGGAGGAAGACGTTGAAAAAATGGTATATTTGCAATCAGTTGTGAAAGAAGTGTTGCGTAAACATCCTCCGACGTTCTTTGCTTTAACGCACTCCGTCACGGAGGCGACGAAATTGGCAGGATACGACATCCCAAAAGACACGAACGTGGAATTCTTCTTACCCGCCATCGGAAGAGATCCGAAGCTGTGGAAGAATCCAGATAAATTCGAACCGGAAAGATTTTACTCCGGCATGGAAGAAGCCGATATTACCGGCGTCAGTGGCGTCAGAATGATGCCGTTCGGCGTAGGGCGGCGGATCTGCCCGGGCTTGGGAATGGCCACCGTTCACATTCATTTAATGCTCGCCAGAATGCTGCAGGAATTTGAATGGACCGCCTATCCGCCGTCGAGCTCCGTCGACTTTTCATGGAAGATGGAATTCACGGTCGTCATGAAGCATCCTCTTACAGCTGTTGTCGAACCTAGGGTTTAA 1386 47.19 MASFSLIAFFLSGLIFFLTRKPIRNRPNLPPGPPGWPLVGNLFQVALSKKPFFEYIEDQRRIYGPIFTLKMGPTRMVVVSDSNLVHEALIKKGVVFADRPRENPTRIIFSSNKFSVNAAVYGPIWRSLRRNMVENMLSSGKVKEFRDVREKAMEKFVKRLRHEAEDNNGVVSVLKNVRFAVFWIMLTIERNRATLVRKKQVEFVVELINRRRRALENPASDGDATPFSYLDTLFDFRIDGRSGGGNSSATEEELVTLCSEFLNGGTDTTATVIEWGMAELIANEEIQRKIVEEIKETVGERKVEEEDVEKMVYLQSVVKEVLRKHPPTFFALTHSVTEATKLAGYDIPKDTNVEFFLPAIGRDPKLWKNPDKFEPERFYSGMEEADITGVSGVRMMPFGVGRRICPGLGMATVHIHLMLARMLQEFEWTAYPPSSSVDFSWKMEFTVVMKHPLTAVVEPRV 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 987254 990225 + MELO3C012364.2.1 Cme10g00136 339022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00136 461 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 398 407 IPR017972 GO:0005506|GO:0016705
Cme10g00136 461 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 187 - -
Cme10g00136 461 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 189 460 - -
Cme10g00136 461 SUPERFAMILY Cytochrome P450 30 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00136 461 PRINTS E-class P450 group I signature 395 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00136 461 PRINTS E-class P450 group I signature 273 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00136 461 PRINTS E-class P450 group I signature 405 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00136 461 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00136 461 PRINTS E-class P450 group I signature 315 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00136 461 PRINTS E-class P450 group I signature 356 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00136 461 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00136 461 PRINTS P450 superfamily signature 264 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00136 461 PRINTS P450 superfamily signature 316 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00136 461 PRINTS P450 superfamily signature 396 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00136 461 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00136 461 PANTHER CYTOCHROME P450 77A4 3 187 - -
Cme10g00136 461 PANTHER CYTOCHROME P450 77A4 189 460 - -
Cme10g00136 461 Pfam Cytochrome P450 178 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00136 461 Pfam Cytochrome P450 30 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme10g00136 461 Gene3D Cytochrome P450 23 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01169 Cme-Chr3:21172218 Cme10g00136 Cme-Chr10:987254 0 dispersed
Cme04g00576 Cme-Chr4:5222450 Cme10g00136 Cme-Chr10:987254 1.96E-31 dispersed
Cme04g01571 Cme-Chr4:23041683 Cme10g00136 Cme-Chr10:987254 1.01E-18 dispersed
Cme05g00652 Cme-Chr5:6982254 Cme10g00136 Cme-Chr10:987254 3.33E-14 dispersed
Cme06g02018 Cme-Chr6:25046629 Cme10g00136 Cme-Chr10:987254 1.84E-34 dispersed
Cme07g00820 Cme-Chr7:7829703 Cme10g00136 Cme-Chr10:987254 5.03E-13 dispersed
Cme09g00809 Cme-Chr9:10348706 Cme10g00136 Cme-Chr10:987254 1.49E-22 dispersed
Cme10g00136 Cme-Chr10:987254 Cme11g00594 Cme-Chr11:6661802 2.95E-100 dispersed
Cme10g00652 Cme-Chr10:4166507 Cme10g00136 Cme-Chr10:987254 2.98E-20 dispersed
Cme10g00653 Cme-Chr10:4166717 Cme10g00136 Cme-Chr10:987254 6.28E-10 dispersed
Cme10g00805 Cme-Chr10:5286128 Cme10g00136 Cme-Chr10:987254 8.92E-14 dispersed
Cme11g00174 Cme-Chr11:1991080 Cme10g00136 Cme-Chr10:987254 1.16E-20 dispersed
Cme11g00175 Cme-Chr11:1991104 Cme10g00136 Cme-Chr10:987254 1.94E-24 dispersed
Cme11g01559 Cme-Chr11:23147801 Cme10g00136 Cme-Chr10:987254 3.50E-13 dispersed
Cme11g02026 Cme-Chr11:28094585 Cme10g00136 Cme-Chr10:987254 1.04E-19 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00136 K21995 - csv:101217068 832.402