Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00162 ATGTCTCCTCTAATTTCAAGGCTTTTATTTCTCAATTTCTGCTTCTTCCTGCTGTTTTTCACCACAAACTCACAAGACAATGGTTCTCAAAAGACATATATTGTGTATATGGGAAATCATCCAAAAGGGAAACCTTCAACACCATCTCACCATATGAGATTACTAAAAGAAACCATTGGCAGTTCTTTCCCTCCAAAATCTTTACTCCATAGCTTCAAGAGAAGCTTCAATGGATTTGTGGCCAAGATGACTGAAGAAGAAGCAAAGAAAGTTTCAGAGATGGAAGGGGTGATATCAGTTTTCCCAAATGGGAAAAAGCAACTGCACACAACAAGATCTTGGGACTTCATGGGCTTCTCGGAACAAGTGAAGAGAGTTCCGGCGGTGGAAAGTGATATCATTGTCGGAGTATTCGACACCGGGATTTGGCCGGAATCTCCTAGTTTTGACGACACGGGATACGGTCCGCCGCCGGCCAAGTGGAAGGGCAGCTGTGAAGTCTCTGCCAATTTCTCTTGCAACAATAAAATCATTGGAGCTCGATCATATCATAGCAGCGGTCAGGACCTAGAAGGCGACATCAAAGGTCCAAGAGATTCAGATGGTCACGGGACACACACAGCATCGACGGTAGCGGGAGGGTTGGTTCAGCAAGCAAATATGTTGGGACTTGGCTTCGGCACAGCCAGAGGTGGAGTCCCATCAGCACGCATTGCCGTATACAAAGTATGCTGGTCCGACGGCTGTGCTGACGCCGACATCCTTGCTGCATTCGACGATGCCATTGCTGACGGCGTCGACATCATCTCTGGCTCTCTCGGAGCACCAGGGTTTGTAAATTACTTCAACGACTCCATGGCCATTGGATCTTTTCATGCAATGAAAAAGGGAATCTTGTCGTCATTAGCAGCTGGAAATACCGGCCCAGGTTTCAGAACCATTGCAAACTACTCGCCATGGTCGTTGACAGTAGCGGCTAGCACTACTGATCGGGTATTCGAAACTATGGTTGAGCTCGGAGATGGAAGAGAATTGAAAGGAGCCAGCATCAATACATTTGATATGAAGGGAAAACAAATTCCATTGGTTTACGGGGGAGATATTCCTAAAGCTAACATAAGCAGTTCCTTGTCGAGGGAGTGCGTTGAGAACTCAGTAGATTTGGAGTTGGCTAAAGGTAAAATTGTAGTGTGCGATACGGTGATCGATGCCACAGAAGTTGTGGCGGTAAAAGGTGCGGTGGGTATTATAATGCAAGATGATTCTCCAATGGATGGCCATTCTTATCCAATTCCTGCTTCTCATGTTGACTCTAAATCTGGTGCTGTCATTCTCTCTTACATCAACTCAACCAATAGCATTCCGACAGCCACAATAAAGAAAAGCACAGAAAGAAAACGTAAAAGAGCTCCATCTGTTGCATCTTTTTCTTCAAGAGGTCCAAACCCAGTAACTCTCAACATTCTCAAGCCAGATTTGAGTGCTCCAGGAGTTGAAATTCTTGCAGCATGGCCTCCAATTTCTTCACCCTCAGGAGCTGTAGAGGATAACCAAAGAGTTCTTTATAATATCATCTCAGGAACTTCAATGGCTTGTCCACATGTTACTGCTGTAGCTGCTTATGTTAAATCATTCCATCCTACTTGGTCTCCTGCTGCCCTTAAATCTGCCCTCATGACTACAGCGTTTCCAATGAGCCCTAAACGTAATAAAGAGAAAGAGTTTGCATATGGTGCTGGTCACTTAAATCCACTAGGCGCAGTGCATCCTGGATTAATCTACGATGCTTCTGAAACTGACTACGTACGGTTTTTATGTGGCCAAGGTTATACCACCGAGTTGCTCCAACTAGTTTCGGAAGACAACAATACTTGTTCTTCGAACGATTCCGACACAGTGTTCGACCTAAACTATCCTTCATTCGCTCTTGCCACGAATGCCTCAGAACCAATCAACCAAGTTTATAGAAGAACTGTCACCAATGTTGGATCAAAATCTGCAACATATAAAGCTACTATAATTAATCCATGGAAGAATCTTGAGATCAAAGTAAATCCTTCTGTTCTTTCGTTCAATCATTTGGGAGAGGAGCAAAGTTTTGAGGTTACAATCAAGGGAAAAATTATGAATGATATTGAATCAGCTTCTTTGGTTTGGGATGATGGAAAACACAAAGTGAGGAGTCCTATAACAGTGTTTTTCTGA 2205 43.9 MSPLISRLLFLNFCFFLLFFTTNSQDNGSQKTYIVYMGNHPKGKPSTPSHHMRLLKETIGSSFPPKSLLHSFKRSFNGFVAKMTEEEAKKVSEMEGVISVFPNGKKQLHTTRSWDFMGFSEQVKRVPAVESDIIVGVFDTGIWPESPSFDDTGYGPPPAKWKGSCEVSANFSCNNKIIGARSYHSSGQDLEGDIKGPRDSDGHGTHTASTVAGGLVQQANMLGLGFGTARGGVPSARIAVYKVCWSDGCADADILAAFDDAIADGVDIISGSLGAPGFVNYFNDSMAIGSFHAMKKGILSSLAAGNTGPGFRTIANYSPWSLTVAASTTDRVFETMVELGDGRELKGASINTFDMKGKQIPLVYGGDIPKANISSSLSRECVENSVDLELAKGKIVVCDTVIDATEVVAVKGAVGIIMQDDSPMDGHSYPIPASHVDSKSGAVILSYINSTNSIPTATIKKSTERKRKRAPSVASFSSRGPNPVTLNILKPDLSAPGVEILAAWPPISSPSGAVEDNQRVLYNIISGTSMACPHVTAVAAYVKSFHPTWSPAALKSALMTTAFPMSPKRNKEKEFAYGAGHLNPLGAVHPGLIYDASETDYVRFLCGQGYTTELLQLVSEDNNTCSSNDSDTVFDLNYPSFALATNASEPINQVYRRTVTNVGSKSATYKATIINPWKNLEIKVNPSVLSFNHLGEEQSFEVTIKGKIMNDIESASLVWDDGKHKVRSPITVFF 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1119033 1122656 + MELO3C034026.2.1 Cme10g00162 339048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00162 734 MobiDBLite consensus disorder prediction 459 478 - -
Cme10g00162 734 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 109 IPR037045 -
Cme10g00162 734 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Cme10g00162 734 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 731 IPR045051 -
Cme10g00162 734 Gene3D Peptidase S8/S53 domain 132 601 IPR036852 GO:0004252|GO:0006508
Cme10g00162 734 MobiDBLite consensus disorder prediction 184 206 - -
Cme10g00162 734 CDD Peptidases_S8_3 106 562 IPR034197 -
Cme10g00162 734 Pfam Peptidase inhibitor I9 32 108 IPR010259 -
Cme10g00162 734 Gene3D - 605 733 - -
Cme10g00162 734 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Cme10g00162 734 PRINTS Subtilisin serine protease family (S8) signature 199 212 IPR015500 -
Cme10g00162 734 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Cme10g00162 734 SUPERFAMILY Subtilisin-like 108 592 IPR036852 GO:0004252|GO:0006508
Cme10g00162 734 Pfam Fibronectin type-III domain 635 732 IPR041469 -
Cme10g00162 734 CDD PA_subtilisin_like 337 459 - -
Cme10g00162 734 Pfam Subtilase family 131 580 IPR000209 GO:0006508|GO:0008236
Cme10g00162 734 PANTHER PUTATIVE-RELATED 21 731 - -
Cme10g00162 734 Gene3D - 330 466 - -
Cme10g00162 734 ProSiteProfiles Serine proteases, subtilase domain profile. 113 588 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00162 Cme-Chr10:1119033 Cme10g00973 Cme-Chr10:7601960 0 dispersed
Cme10g00975 Cme-Chr10:7641386 Cme10g00162 Cme-Chr10:1119033 1.73E-56 dispersed
Cme10g00161 Cme-Chr10:1113044 Cme10g00162 Cme-Chr10:1119033 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00162 - - csv:116404044 1292.33