Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00165 ATGGGTGTTCCAGCAACTGCCACTGCAACTTTGGGGGATGATTTTCTCAGAGAAAGAGCGGCTAAGATGAGAGAATCACTGCAAAAGAGCCAAACTATTACTGATAACGTTGTCACCATACTTGGCTCCTTTGACCACCGTCTTTCTGCTCTCGAAACCGCCATGCGCCCTACTCAGATCAGAACCAATTCAATTCGTAAAGCTCACGAAAACATTGACAAGACTTTGAAGTCTGCGGAGGTTATTTTAACACAATTTGATCTCTCTCGTCAGGCAGAAACGAAAATACTTAGAGGGCCACACGAGGATTTGGAAAGTTATCTCGGGGCAATTGGTCAATTAAGAAACATTATCAGATTTTTTAGCAGCCATAAAGGTTTTAAGAGTAGTGACGTAGTGCTTAACCAGGCAAATAATTTGCTTGCAAAAGCCATCTCAAAGCTGGAAGATGAGTTCAGACAGCTATTATCTTCCTACAGCAAACCTGTGGAGCCTGAGCGTCTTTTCGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGATTCTCCTGGTCATGATTCGGGTGGAAAGAATCATCATTCTGCACATCATGATAATAGCTTAGAGACTGCTGTCTACACACCTCCCACTCTCATACCACCACGAGTTCTACCACTGCTGCACGATCTATCGCAGCAAATGGTTCAAGCTGGTCATCAACAACAAATTTTAAAAGTCTACAGGGACACCCGTTCAGTTGTCCTGGAAGAAAGCCTACGGAAATTAGGAGTTGAAAAACTTAGCAAAGAGGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCAAAAATTGGGAACTGGATTCATTTTATGCGTATTGCAGTTAAACTGCTATTTGCTGGTGAACGAAAAGTTTGTGACCAAATATTTGAAGGCTTTGAGTCGCTTAGAGATCAATCATTTGCAGAGGTTACAAGTAGTAGCGTTTCTGTGCTATTCAGTTTCGGGGAGGCGATTGCAAATAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTTTTGGACATGTATGAAATTATGCGAGAGCTTCACTCTGAGATAGAGACAATTTTTAAGGGTAAAGCATGCAATGAGATCAAGGAATCTGCATCGGGTTTGACCAAACGGCTTGCACAAACAGCTAAGGATACATTTGGTGATTTTGAGGTAGCTGTTGAAAAAGATGCCACAAAAACTGCGGTGTTGGATGGAACTGTTCATCCTTTAACAAGCTATGTGATCAATTACGTCAAATTTCTTTTTGACTATCAAGCAACCTTGAAGCAACTTTTCCAAGAATTTGAAGATAGCGGTCAAACAAATTCGGAATTGGCCAGTGTCACAATGCAAATAATGCAGGCTCTTCAGTCTAATTTGGATGGAAAATCTAAGCATTACAGGGATCCTGCTTTGACTCACTTATTCCTCATGAACAACATACACTATATAGTTAGATCTGTTCGCAGATCTGAAGCCAAGGATTTGCTGGGGGACGATTGGGTTCAGAGACATAGGAGGGTCGTACAACAACATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATTCTGCAATGCCTCTCTGTTCAAGGGTTAACTTCATCTGGCGGTGGCAGTGTACCAGGCATAGATGGAGGAAATAGTAGCGGAGTTTCTAAGGCCCTTATTAAAGACAGGTTCAAGACTTTCAATATGCAGTTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCTGATACTGAGTTGCGGGAGTCTCTAAGACTTTCGGTTGCTGAAGTCTTACTTCCTGCATACAGATCCTTCCTGAAACGTTTCGGGCCACTGATTGATGGTGGAAAGAATCCCCAAAAGTACGTCAGATACCAGCCAGAGGATCTCGAAAGGATGCTGGGAGAATTTTTTGAAGGGAAGAATGTGAATGAACCTAAACGGTAA 1956 42.38 MGVPATATATLGDDFLRERAAKMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKSAEVILTQFDLSRQAETKILRGPHEDLESYLGAIGQLRNIIRFFSSHKGFKSSDVVLNQANNLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSDSPGHDSGGKNHHSAHHDNSLETAVYTPPTLIPPRVLPLLHDLSQQMVQAGHQQQILKVYRDTRSVVLEESLRKLGVEKLSKEDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFESLRDQSFAEVTSSSVSVLFSFGEAIANSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACNEIKESASGLTKRLAQTAKDTFGDFEVAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFEDSGQTNSELASVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWSKILQCLSVQGLTSSGGGSVPGIDGGNSSGVSKALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLIDGGKNPQKYVRYQPEDLERMLGEFFEGKNVNEPKR 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1139854 1147387 - MELO3C012338.2.1 Cme10g00165 339051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00165 651 Coils Coil 134 154 - -
Cme10g00165 651 Pfam Exo70 exocyst complex subunit 279 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cme10g00165 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 40 647 IPR004140 GO:0000145|GO:0006887
Cme10g00165 651 SUPERFAMILY Cullin repeat-like 82 642 IPR016159 -
Cme10g00165 651 MobiDBLite consensus disorder prediction 172 196 - -
Cme10g00165 651 Gene3D Exocyst complex component Exo70 80 651 - -
Cme10g00165 651 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 40 647 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g01155 Cme-Chr8:8162163 Cme10g00165 Cme-Chr10:1139854 0 dispersed
Cme10g00165 Cme-Chr10:1139854 Cme12g01592 Cme-Chr12:23218332 8.12E-114 dispersed
Cme10g00165 Cme-Chr10:1139854 Cme11g01259 Cme-Chr11:19404241 3.06E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00165 K07195 - csv:101206262 1249.96