Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme10g00277 | ATGAGGACAAAAAAAATGCCTACCATTAACCTTGATCAAATTCCAAGTTTTGAAGAACATGTTAATGGCTTTGATCAACATGATGTGTTGGTTGAGGAGATTGAAGGCCTGATTAGAGTTTACGGAAATGGGTATGTGGAAAGACCCCAGATAGTTCCCTGTGTCTCTAATGCATTGCCGCCAGAGCTCGGTGTTACTTCTTGGGATGTAGTTGTGGATAAACTGAACAACATTTGGGCTCGTTTCTATATTCCGACACAGTGCCAGGAGAAGCTGCCTTTGATTGTATACTTCCATGGAGGTGGGTTTTGTGTTGGCTCGGCCGCTTGGAGTTGCTACCATGAGTTCCTGGCCAAGCTCTCTGCAAAATCTGACTGTATAATTATATCTGTGAATTATCGTTTGGCTCCAGAAAACCCTCTTCCTGCTCCTTATGAAGATGGATTAAAGACCCTTCAATGGTTGAAACAAGTTGCTTTTGTAGGGGGCAAGCAGAATTGGTGGTCAAGATACTGCGACTTTACCAAAATCTACCTTAGTGGTGATAGTGCCGGTGGCAACATAGCCTTCAATGTAGCTGCCAGACTTGGTGGTAAGACGACTGCTTCTGGAGCTGTGATTTTGAAACCGTTAGTTATTAAAGGTAGCATTTTGATACAACCATTTTTCGGTGGAGAGTCAAGGACCAATTCAGAGAAGTTTCTTGTCCAACCTCCTCGTTCCCCACTGACGTTGGGGGTTTCCGATACGTACTGGCGGCTGGCGTTGCCTTCCGGGACAAACCGTGACCACCCATGGTGCAATCCTTCTACAAAAGGATTGTTTACGGTGGAGGATTCGAGGGTTTTGCCTAGTTTGATATGCATATCAGAAATGGACATATTGAAAGATAGGAACTTGGAGTTTTGCTCTGCTTTACATAGAGCGGGTAAGCTGATCAATTATGTGGTTTACGAAGGAGTTGGCCATGCGTTTCAGGTTCTGAACAAGTCACAACTCTCACAAACTCGGACCCTTGAAATGTTTGATCACATCAAGGATTTCTTGTGTGTATAG | 1056 | 44.22 | MRTKKMPTINLDQIPSFEEHVNGFDQHDVLVEEIEGLIRVYGNGYVERPQIVPCVSNALPPELGVTSWDVVVDKLNNIWARFYIPTQCQEKLPLIVYFHGGGFCVGSAAWSCYHEFLAKLSAKSDCIIISVNYRLAPENPLPAPYEDGLKTLQWLKQVAFVGGKQNWWSRYCDFTKIYLSGDSAGGNIAFNVAARLGGKTTASGAVILKPLVIKGSILIQPFFGGESRTNSEKFLVQPPRSPLTLGVSDTYWRLALPSGTNRDHPWCNPSTKGLFTVEDSRVLPSLICISEMDILKDRNLEFCSALHRAGKLINYVVYEGVGHAFQVLNKSQLSQTRTLEMFDHIKDFLCV | 351 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 1812749 | 1813896 | - | MELO3C012228.2.1 | Cme10g00277 | 339163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme10g00277 | 351 | Gene3D | alpha/beta hydrolase | 49 | 350 | IPR029058 | - | |
| Cme10g00277 | 351 | PANTHER | ARYLACETAMIDE DEACETYLASE | 20 | 349 | - | - | |
| Cme10g00277 | 351 | SUPERFAMILY | alpha/beta-Hydrolases | 29 | 349 | IPR029058 | - | |
| Cme10g00277 | 351 | ProSitePatterns | Lipolytic enzymes "G-D-X-G" family, putative serine active site. | 177 | 189 | IPR033140 | - | |
| Cme10g00277 | 351 | Pfam | alpha/beta hydrolase fold | 95 | 326 | IPR013094 | GO:0016787 | |
| Cme10g00277 | 351 | PANTHER | CARBOXYLESTERASE 6-RELATED | 20 | 349 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme03g01482 | Cme-Chr3:24034005 | Cme10g00277 | Cme-Chr10:1812749 | 2.10E-60 | dispersed | |
| Cme08g01144 | Cme-Chr8:8082664 | Cme10g00277 | Cme-Chr10:1812749 | 4.53E-37 | dispersed | |
| Cme10g00277 | Cme-Chr10:1812749 | Cme09g00118 | Cme-Chr9:880747 | 4.29E-47 | dispersed | |
| Cme10g00306 | Cme-Chr10:1995500 | Cme10g00277 | Cme-Chr10:1812749 | 2.05E-06 | dispersed | |
| Cme11g00528 | Cme-Chr11:5468292 | Cme10g00277 | Cme-Chr10:1812749 | 3.21E-40 | dispersed | |
| Cme10g00277 | Cme-Chr10:1812749 | Cme03g02012 | Cme-Chr3:27826563 | 1.16E-48 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme10g00277 | - | - | csv:101213887 | 713.375 |