Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00300 ATGAATTATGTTGATTTGTGTAATGGGTATCATGTGTTTGTTCTTTTGTTACGATTTTCAGCAATTTTGGTTCATAGTTGGTTGCCTGGTTCGAGAAATTTGAGGAAATCTGTTCATCTGAGTCTTCAAGGGCTAGCTTTGGCTTCTGGGATTTCCGGAATTTGGACCAAGTTTCATTGGGATCGTGGCTTTTTGGCTAATTTCCACAGTTTACATTCTTGGATGGGTTTGGTTGTCATCACTTTGTTTGGGGCTCAGTGGATGATGGGGTTCCTGAGCTTCTGGCATTGGAGGGAGGTGAGGGCAACAAGAGAAAGAGTGCTGCCATGGCATGTGTTTCTTGGTTTATACAGTTATGCATTGAGAAGTTGA 372 42.2 MNYVDLCNGYHVFVLLLRFSAILVHSWLPGSRNLRKSVHLSLQGLALASGISGIWTKFHWDRGFLANFHSLHSWMGLVVITLFGAQWMMGFLSFWHWREVRATRERVLPWHVFLGLYSYALRS 123
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1960972 1963299 - MELO3C012207.2.1 Cme10g00300 339186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00300 123 Pfam Eukaryotic cytochrome b561 16 121 IPR006593 -
Cme10g00300 123 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED 15 121 - -
Cme10g00300 123 ProSiteProfiles Cytochrome b561 domain profile. 1 123 IPR006593 -
Cme10g00300 123 Gene3D - 10 123 - -
Cme10g00300 123 PANTHER CYTOCHROME B561-RELATED 15 121 IPR043205 GO:0016491
Cme10g00300 123 SMART 561_7 10 121 IPR006593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00300 Cme-Chr10:1960972 Cme10g01545 Cme-Chr10:19760460 7.52E-17 dispersed
Cme10g00300 Cme-Chr10:1960972 Cme09g00161 Cme-Chr9:1234506 5.92E-27 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00300 K08360 - csv:101205948 216.853