Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00306 ATGCCGTCGCCTCCGATCCTACCTATCACCCAGCCTCCTTCTTCGTCTCCATTTTCCTCTGGAGGCTCCGTCACCAATTCGATTATGGCAACTACATCTACTGCCGTAGACATTATGGTGCTTAAAGAAGACGATGAACATAGGACTGGAGTTCTTGTTTCTCCATTGTTCGATGACGATAGGTCAATAGCTCATAAGCCCCTTCTTCCTAGGACTTCAAGCTATGCCTCCTCCACATCAACTTCCTCCTCCGGCAGCACTATGTACAAGCAGAAGCGGAGGCGAGTCAAGAGTGAAGAATTTTTATCCTTTCTCTCAGGTGACGGCCGCCACCAGACTGTTGATCATGATGTGGAGAATGCCGATGTTGAGAGAGCTGAAAGATTTCTACTGACCCGTTTCGGTTTGAAACTCTCGAAATACATTCGGGTAGCATTTAGATGGATTGCAAGATTTCTGGCACTTGGTTGCTATTCATTTTTTCTTCTTCCAGGTTTTCTTCAAGTTGGTTATTATTATTTCTCTTCCAGTCAGATACGCAGAAGTATACCCTATGGTGATAAACCAAGGAATAAGTTGGATCTTTATCTTCCAAGACATATTGACGGCCCAAAGCCAGTTGTTGCATTTATCACTGGTGGGGCTTGGATTATTGGCTACAAAGCTTGGGGTTGTCTTTTAGGACAACAATTATCAGAAAGAGATGTCATTGTAGCATGCATCGATTACAGAAATTTTCCTCAGGGAACTATGAGTGATATGATTGATGATGCTTCCCAAGGTATCTCGTTCTTGTGTAATAACATTAGAGAATTTGGAGGCGATCCAAACAGAATTTATCTAATGGGTCAGTCAGCTGGAGCACATATAGCTGCCTGCACGCTTTTGGAGCATGCAATGAAAGAGGTTCGCAAAGTAGAAAGTATCTCTTGGAGTGTGTCCCAGATCAAAGCTTATTTTGGTTTGTCAGGAGGGTATAATTTGCTCAATCTGGTAGATTACTTTCACTCTCGAGGTCTATCTCGTTCTCTGTTTCTAAGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCTGAGTTAATGATCTTGGAAGAACCCAACATAGGAGCAGCAGTCTCGATTCTTCCTCCCATCATTTTATTCCATGGAACAGCAGACTATTCTATACCATCAGATGCTAGTAAAACTTTTGCTGAGACGCTTCAAAGCGTTGGAGTGAAAGCCGAAACATTTTTCTACGAAGGAAAGACACATACAGATGTATTTGTTCAGGATCCATTGAGGGGTGGGAGAGATCAAATGTTTGAAGATCTTGTTGCTATCATCCATGCCAATGACGCGGAAGCGCTGGCAAAAGATGCGGTAGCACCTCCAAGAAGACGATTTGTACCCGAGATTATGTTGACGTTGGCTCGTACTGTTAGCCCCTTCTAA 1440 43.19 MPSPPILPITQPPSSSPFSSGGSVTNSIMATTSTAVDIMVLKEDDEHRTGVLVSPLFDDDRSIAHKPLLPRTSSYASSTSTSSSGSTMYKQKRRRVKSEEFLSFLSGDGRHQTVDHDVENADVERAERFLLTRFGLKLSKYIRVAFRWIARFLALGCYSFFLLPGFLQVGYYYFSSSQIRRSIPYGDKPRNKLDLYLPRHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERDVIVACIDYRNFPQGTMSDMIDDASQGISFLCNNIREFGGDPNRIYLMGQSAGAHIAACTLLEHAMKEVRKVESISWSVSQIKAYFGLSGGYNLLNLVDYFHSRGLSRSLFLSIMEGEQSLKRFSPELMILEEPNIGAAVSILPPIILFHGTADYSIPSDASKTFAETLQSVGVKAETFFYEGKTHTDVFVQDPLRGGRDQMFEDLVAIIHANDAEALAKDAVAPPRRRFVPEIMLTLARTVSPF 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1995500 2000098 - MELO3C012201.2.1 Cme10g00306 339192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00306 479 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 113 469 - -
Cme10g00306 479 Pfam BD-FAE 193 403 - -
Cme10g00306 479 Gene3D alpha/beta hydrolase 173 428 IPR029058 -
Cme10g00306 479 MobiDBLite consensus disorder prediction 72 89 - -
Cme10g00306 479 MobiDBLite consensus disorder prediction 72 94 - -
Cme10g00306 479 SUPERFAMILY alpha/beta-Hydrolases 181 445 IPR029058 -
Cme10g00306 479 PANTHER ARYLACETAMIDE DEACETYLASE 113 469 - -
Cme10g00306 479 MobiDBLite consensus disorder prediction 1 23 - -
Cme10g00306 479 ProSitePatterns Carboxylesterases type-B serine active site. 272 287 IPR019826 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01653 Cme-Chr6:17859434 Cme10g00306 Cme-Chr10:1995500 3.63E-173 dispersed
Cme10g00306 Cme-Chr10:1995500 Cme10g00277 Cme-Chr10:1812749 2.05E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00306 K15889 - csv:101206426 900.582