Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00322 ATGCCCATTTTCCATATTTCCCACTTTCTAAACCTTAATTTCAAAATCAAAATGGGAATCTCAAATAAAGTTTATGGAGTTGTGATGATGATTGTGTATTGTGGTTTGTTTGTTGTGAGCTATAGTTTGTTTGAAACAGGGGAGACCCGATTGACTTTGGATTACTATGCCAAAACTTGTCCCAATGTGTTACAGATTGTGAGGAAGGAGATGGAGTGTGCTGTTCTTTCTGAACCGCGTAATGCAGCTCTTGTTGTTCGATTGCATTTTCATGATTGTTTCGTTCAGGGGTGCGACGGGTCAGTTTTGCTGGACGACACAATAACATTACAGGGAGAAAAAAAAGCTTCCAACAACATACACTCTCTCAAAGGCTTTAGAATCATTGATAGGATAAAGAACAGCATTGAATCAGAATGTCCTGGGATTGTTTCTTGTGCTGATATACTCACTATTGCTGCCAGGGATGCTGTGATTCTGGTGGGTGGGCCTTACTGGGATGTTCCCCTAGGAAGAAAGGATTCGACAAGTGCAAGTTATGAACTTGCAAACACAAATCTTCCCTCTGCCAATGAGGGGCTTCTCAGCATCATCTCCAAGTTTCTTTATCAGGGTCTCTCGGTTACTGACATGGTAGCTCTATCAGGAGCGCACACAATCGGAATGGCAAGGTGTGAGAATTTCAGACAAAGAATCTATGGGGATTTCGACGCGACTTCAGACCCAAACAACCCGATTTTGAGGTCGTACATCGAGAAGTTAAGGTCAATATGTCCCTTAGTTGGTAAAACAGGAGAGAACAACATAACAGCAATGGACAATATGACACCAGAGCTATTTGACAACTCTTATTTCCAAATGTTGATGAGAGGAGAAGGGGTTTTGAATTCAGATCAAGAATTGTATTCCAGCCTTTTGGGGATAGAAACTAAGGCATTGGTGAAGAAATATGCTGCCGATCCAATTGCTTTCTTTCAGCAATTCTCTGATTCTATGGTGAAATTGGGAAATATTACCAATTCTGATAGCTTTGTCAATGGAGAAGTTAGGAAAAACTGCAGGTTTATTAATACATGA 1077 40.76 MPIFHISHFLNLNFKIKMGISNKVYGVVMMIVYCGLFVVSYSLFETGETRLTLDYYAKTCPNVLQIVRKEMECAVLSEPRNAALVVRLHFHDCFVQGCDGSVLLDDTITLQGEKKASNNIHSLKGFRIIDRIKNSIESECPGIVSCADILTIAARDAVILVGGPYWDVPLGRKDSTSASYELANTNLPSANEGLLSIISKFLYQGLSVTDMVALSGAHTIGMARCENFRQRIYGDFDATSDPNNPILRSYIEKLRSICPLVGKTGENNITAMDNMTPELFDNSYFQMLMRGEGVLNSDQELYSSLLGIETKALVKKYAADPIAFFQQFSDSMVKLGNITNSDSFVNGEVRKNCRFINT 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2115991 2121746 - MELO3C012183.2.1 Cme10g00322 339208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00322 358 Pfam Peroxidase 67 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 ProSiteProfiles Plant heme peroxidase family profile. 50 357 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 PANTHER PEROXIDASE 11 42 356 - -
Cme10g00322 358 PRINTS Plant peroxidase signature 60 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 PRINTS Plant peroxidase signature 84 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 PRINTS Plant peroxidase signature 124 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 PRINTS Plant peroxidase signature 143 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 PRINTS Plant peroxidase signature 162 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 PRINTS Plant peroxidase signature 209 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 PRINTS Plant peroxidase signature 271 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 PRINTS Plant peroxidase signature 287 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 PRINTS Plant peroxidase signature 330 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 SUPERFAMILY Heme-dependent peroxidases 51 357 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 ProSitePatterns Peroxidases active site signature. 82 93 IPR019794 GO:0004601
Cme10g00322 358 Gene3D - 55 357 - -
Cme10g00322 358 ProSitePatterns Peroxidases proximal heme-ligand signature. 210 220 IPR019793 -
Cme10g00322 358 PRINTS Haem peroxidase superfamily signature 82 96 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 PRINTS Haem peroxidase superfamily signature 144 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 PRINTS Haem peroxidase superfamily signature 162 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 PRINTS Haem peroxidase superfamily signature 273 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 Gene3D Peroxidase, domain 2 188 335 - -
Cme10g00322 358 PANTHER PEROXIDASE 72-RELATED 42 356 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme10g00322 358 CDD secretory_peroxidase 51 356 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00322 Cme-Chr10:2115991 Cme03g01035 Cme-Chr3:19575862 5.89E-101 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00322 K00430 - csv:101216779 659.448