Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme10g00347 | ATGGGTAAAACCGGAGCCAAATTGCCAAGTTTCTGCCTGAACCGGATACGGCCTCATGTTAGAGTCCCTATTCAATCCAAACCGGACTATGTTTCGGCAAAAACCGGTCCGAACAAGAAGATTGATGATTGTTCGGATGAGAAGAATGATCATATTGGGGTTGATCAAAGTAATAAGGGAGTGATGGGAATTGGAAGGAAGATCATGATTGTTGTTGATTCCACCATTGAAGCAGAAGGAGCTCTTCATTGGGCTCTCTCTCATACTGTCCAAATTCAAGACAACATTCTTCTTCTCCATGTCACTAAACCTTCATCTAAAGGGGAAGGACCCAATAAGGAGACAGCACCAAGAGCTTATGAATTGGTTCATTCAATGAGGACTTTATGCCAATTGAAGAGACCTGAGGTGGAAACGGAGGTTGTAGTAGTGGAAGGAGGGAAGGAGAAGGGGGCAGTGATAGTGGAAGAAGCGAGAAAGAGAGGGGTGTCGTTGTTGGTATTGGGGCAGAAGAAACGGTCGACTACATGGCGGCTTTTGATGGTGTGGGCAGGGCAGCGGTGGGGCGGTGGCAGCAGTGGAGGCGTGGTGGAGTATTGTATACAGAATGCGAGTTGTATGGCGATTGCAGTGAGAAGGAAGAGCAAGAAATTGGGTGGTTATTTGATCACTACAAAGCGTCAAAAGGATTTCTGGCTTTTGGCTTAA | 708 | 46.47 | MGKTGAKLPSFCLNRIRPHVRVPIQSKPDYVSAKTGPNKKIDDCSDEKNDHIGVDQSNKGVMGIGRKIMIVVDSTIEAEGALHWALSHTVQIQDNILLLHVTKPSSKGEGPNKETAPRAYELVHSMRTLCQLKRPEVETEVVVVEGGKEKGAVIVEEARKRGVSLLVLGQKKRSTTWRLLMVWAGQRWGGGSSGGVVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA | 235 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 2245316 | 2247190 | - | MELO3C012161.2.1 | Cme10g00347 | 339233 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme10g00347 | 235 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 66 | 215 | - | - | |
| Cme10g00347 | 235 | Pfam | Universal stress protein family | 66 | 212 | IPR006016 | - | |
| Cme10g00347 | 235 | Gene3D | HUPs | 55 | 215 | IPR014729 | - | |
| Cme10g00347 | 235 | CDD | USP_Like | 67 | 181 | - | - | |
| Cme10g00347 | 235 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN | 1 | 235 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme06g00443 | Cme-Chr6:2819268 | Cme10g00347 | Cme-Chr10:2245316 | 1.55E-22 | dispersed | |
| Cme10g00347 | Cme-Chr10:2245316 | Cme12g01896 | Cme-Chr12:25121796 | 8.70E-09 | dispersed | |
| Cme10g00347 | Cme-Chr10:2245316 | Cme12g01919 | Cme-Chr12:25229730 | 6.01E-51 | wgd | |
| Cme10g00347 | Cme-Chr10:2245316 | Cme02g01809 | Cme-Chr2:24864415 | 7.83E-60 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme10g00347 | - | - | csv:101211142 | 414.461 |