Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00354 ATGTGTGGAATCGCTTTGATCGTTTCGGGCATTCGCCTTGATTTATCTTCTCTACATGTAGACGCCAGACCCCTGTCTCCTTCTTCAGTTCACGAGCAACTCGAGTTTTCAATTGATGATCTTAAAGCAGTATTACGGAGAAGAGGGCCCGATAGCTTAGGCGGAGTGAAGGTTTCTCTTTCTTCAAAATCTTCTTATCCCAGTGAAGAACAGCAGTTGGAGTGTTTCATTGAGAGGGTTGATGATTGCGTTGCATTCCAAAATCAAAATGATCAATACGAGATGGAAAATGGCCGCTTTTGTTCTGAAAATGGATGTATTCTCCAATCAGAGAACGGTTGCAGTAATCCCATCTCTGGTACGGGGCTTTATTTACTTGGGGCCACGTTACAACTTAGAGGGGTTAACCCTATTGTTCAGCCGCTGATGGATGCTTCCCGCAATATTCTTGTTTACAATGGTGAAATATTTGGAGGACTACATGTTGAGTGTCATGAAAACGATGCCGAAAGTCTTATGCTAGCACTTCGGAATTGTTGCTCATGTAATTTTAGTTTAGATATGAACGCATGTGAAGATGAATGTAAGAGAGAAAGAACTATTGTAGATACTCTTTCAAAGATCCAAGGGCCATGGTCAATCATCTACTGGCAGGATAGCGCAAAAACTTTGTGGTTTGGTCGGGATGCCTTTGGTAGGCGAAGTCTTCTTGTTCACTGGCCAACAGTGGAGGATTCTCGGTTTCTGTTGTCGTCTGTATCACCAGCTTCTTCCATGTTTCAAGACTCAGCAGGGCTTGAAGTTGACAGTGGTACTTGTCAAGTGAGCTTCTGGGAAGAACTACCATGTGGGATTTACAGCGTCTCTTTTGATGCTCAGAAAACTGACGGTTGCGTGGTTGGTGAAGTTAGAAGGCATGAATGGACCAATGAGTCACTGAAAGAGCTTGTTGAGTGGAAAAGAACTCGTATTGAACCTGAACATGGAGACATCTCCACTCCATATCACAAGGATTGTTTGTCACAACATGAAAGCCATTCAACATGTTTACATAACTTGCAATCAGCGTTGGGGAATTTCCAAGCTCCTGTCTCAACACCTGCAGAGATTCTACTGGATGCTCTGAGGAAGTCTCTTGTCCGGCGGACTTCATTTTATACAATTTTCCAGGCTACGACATCTGCTTCCAGAAAAGCAGAACTTGGTCCAGTGGCCATTCTTTTCTCTGGTGGGTTGGATTCTATGATTCTAGCAGCATTACTGGACGAATGTCTCGGCCCCTGTTATGAGGTGGATCTTCTCAATGTCAGCTTTGATGGATGTTCTGCACCTGACCGAATCTCTGCGAAGGCTGGTGTTAAGGAACTGAGTAGAATTGCCCCTCTAAGAAGGTGGAAGCTGGTTGAGATTGATGCTGATATGTCAGATTTGACCTCTGAAACCAAGCACGTCATGTCTCTAATAAATCCTGCAAACACATACATGGACCTAAATATTGGAATAGCTTTGTGGCTGGCCTCTGGTGGCAATGGTTGGATCTATGAATCAGTTGATGAGGATGAGAAGTTCCATCAACGTGTAAAATACAAGTCTGAGGCCAAGATTCTCCTTGTTGGTTCTGGTGCGGATGAGCAATGTGCTGGCTATGGCAGGCATCGAACAAAATATAGACAAGGGGGTTGGCATCTTTTAAATGAGGAAATGAAGTTGGATATCCAGAGAATCTGGAAGAGAAATCTAGGGAGAGATGACAGATGTATTGCAGATAATGGGAAGGAGGCCAGATTTCCCTTTTTGGATGAAGACGTTATACGTACATTGCTAGCATTCCCTCTATGGGAGGTTACTGACCTTGAGAAACCTGCTGGAACCGGTGACAAGAAGATACTTAGGGAGGTTGCAAAATTACTTGGCCTGCACGAAGCAGGGGTTCTACCTAAAAGAGCAATACAGTTTGGCTCAAGGATTGCAAGGGAATCAAACCGCAAGAACTTTGGAAGCAACCGGGCTGCTAATCAGGCCAACGCCGGAAGTGTGAAGTTCAACAAACAATCTAATAAGCTGAAGAGAGCCCGCTTTGGTAAACAATAA 2091 44.19 MCGIALIVSGIRLDLSSLHVDARPLSPSSVHEQLEFSIDDLKAVLRRRGPDSLGGVKVSLSSKSSYPSEEQQLECFIERVDDCVAFQNQNDQYEMENGRFCSENGCILQSENGCSNPISGTGLYLLGATLQLRGVNPIVQPLMDASRNILVYNGEIFGGLHVECHENDAESLMLALRNCCSCNFSLDMNACEDECKRERTIVDTLSKIQGPWSIIYWQDSAKTLWFGRDAFGRRSLLVHWPTVEDSRFLLSSVSPASSMFQDSAGLEVDSGTCQVSFWEELPCGIYSVSFDAQKTDGCVVGEVRRHEWTNESLKELVEWKRTRIEPEHGDISTPYHKDCLSQHESHSTCLHNLQSALGNFQAPVSTPAEILLDALRKSLVRRTSFYTIFQATTSASRKAELGPVAILFSGGLDSMILAALLDECLGPCYEVDLLNVSFDGCSAPDRISAKAGVKELSRIAPLRRWKLVEIDADMSDLTSETKHVMSLINPANTYMDLNIGIALWLASGGNGWIYESVDEDEKFHQRVKYKSEAKILLVGSGADEQCAGYGRHRTKYRQGGWHLLNEEMKLDIQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIRTLLAFPLWEVTDLEKPAGTGDKKILREVAKLLGLHEAGVLPKRAIQFGSRIARESNRKNFGSNRAANQANAGSVKFNKQSNKLKRARFGKQ 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2288279 2294060 - MELO3C012156.2.1 Cme10g00354 339240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00354 696 Pfam Glutamine amidotransferase domain 140 252 IPR017932 -
Cme10g00354 696 Gene3D HUPs 365 693 IPR014729 -
Cme10g00354 696 MobiDBLite consensus disorder prediction 661 696 - -
Cme10g00354 696 CDD Asn_Synthase_B_C 402 653 IPR001962 GO:0004066|GO:0006529
Cme10g00354 696 Pfam Asparagine synthase 525 637 IPR001962 GO:0004066|GO:0006529
Cme10g00354 696 MobiDBLite consensus disorder prediction 661 684 - -
Cme10g00354 696 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 26 273 IPR029055 -
Cme10g00354 696 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 41 254 IPR029055 -
Cme10g00354 696 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 1 673 - -
Cme10g00354 696 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 398 658 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00354 - - csv:101211806 1264.98