Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00356 ATGGCAGCGAGGGGTAGTCGTGAAAGAAGTTCACATACAACAGGACAGCCAGATATAATAGGATTAGGTAGTATAAATTCTGGAGGTACTGGTGGCAAAGGCGTTTCGCTTCCCCCAACCAAACAGCTGGGTTTTGGGTCTGCATCGTCTATAGATTTGTTGGAAATATCAGATCTCGCTCAAGTTGGAGCAAATGTTAACCGACCTGAAGCAGACACGATTTGTTTGGCAAATCCTGGTCGTGGGATTTACCAGCTTCAATTTAAAGATGATGATAGCAATGTTTCCAGCAATTGTTCTTCCAAATCAGAGAAGAGCAGCGGTTCTCCATGTCCAACATCTGTATCCCAAGTGTCAGGTCTTACCCATGAGTCTGGTGGAAATGTTTTGTCCCCAACTCAATCCCCTTCTCTTCAAACAATGGATCGTATGGGAGGATATGATGAATCATATGACCCCTTTAGAATCCCATCTGCAGTTTTCCAAAGAAGTAGTTCTGTTACTCCGATGGAATGGAGTATTGCTTCAAATGAGTCATTGTTTAGCATTCAGGTCGGAAACAATAGCTTCTCCAGAGATCATGTGTCGATGTTGAGTGAGTTTGGTAAGTCTGGTGAGTTAACGAAATCTGGCAAGTTCAAAAAAGCAGACGAGTCGTTTGTGTTTAGCCAACCACCTGCAGTTATCACGTCAAGAGAAGCTGAAATGAAGAGTGCTGAATATGAAGAGGGTCCTAAAATGGCAGATACCATAGAATATAACATAAAGGATAAAGGGGGATCGATTACAGACGATGATCTTAGTGACAGAAACCTACCACCTCCAGCAGTATCATGGAATTCCTCTACCAAATCTCGGCACTCTGATAAAAGTCAAAGTAGCTCAGATTCATTCGCTTTCCCCATATTGTTCTACTACGGAATTGGCCTGCCACAAAGAAGAAGTGCGCATGCCCATCGTGTTACCGTTCTAACTGTAGTCAGGCGTTCTGCTACTGCTCGTGGCCACGTTGCTACCCTACATGGTCAAACTGTTGTTGCGGGAACTGTAGCAGGACGTTCAGCTATTGTTGGAACTGTAGCCGAAGAGGATTTTGTTGTCGCATTCAGACCTCTAAAATGTATGCTCCGTACTCTTCAACATTATTAA 1149 43.69 MAARGSRERSSHTTGQPDIIGLGSINSGGTGGKGVSLPPTKQLGFGSASSIDLLEISDLAQVGANVNRPEADTICLANPGRGIYQLQFKDDDSNVSSNCSSKSEKSSGSPCPTSVSQVSGLTHESGGNVLSPTQSPSLQTMDRMGGYDESYDPFRIPSAVFQRSSSVTPMEWSIASNESLFSIQVGNNSFSRDHVSMLSEFGKSGELTKSGKFKKADESFVFSQPPAVITSREAEMKSAEYEEGPKMADTIEYNIKDKGGSITDDDLSDRNLPPPAVSWNSSTKSRHSDKSQSSSDSFAFPILFYYGIGLPQRRSAHAHRVTVLTVVRRSATARGHVATLHGQTVVAGTVAGRSAIVGTVAEEDFVVAFRPLKCMLRTLQHY 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2303991 2307203 - MELO3C012154.2.1 Cme10g00356 339242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00356 382 PANTHER SUPPRESSOR SRP40-LIKE PROTEIN 49 304 - -
Cme10g00356 382 MobiDBLite consensus disorder prediction 94 141 - -
Cme10g00356 382 MobiDBLite consensus disorder prediction 1 42 - -
Cme10g00356 382 MobiDBLite consensus disorder prediction 94 145 - -
Cme10g00356 382 MobiDBLite consensus disorder prediction 7 33 - -
Cme10g00356 382 PANTHER - 49 304 - -
Cme10g00356 382 MobiDBLite consensus disorder prediction 259 295 - -
Cme10g00356 382 MobiDBLite consensus disorder prediction 274 295 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00356 Cme-Chr10:2303991 Cme02g01828 Cme-Chr2:25018511 2.24E-19 wgd
Cme10g00356 Cme-Chr10:2303991 Cme09g00216 Cme-Chr9:1686011 4.12E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00356 - - cmo:103489558 529.25