Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme10g00360 | ATGGCTGTTTTTGTGTTCTTTGTGTTTTTTCTTGCGCTAACTGGTCGATCTTGTGCGAACTATTGCTTGTGTAGAGATGGGGTTGGTCAATCCGTCCTTCAAAAGGCACTGGACTATGCCTGTGGAAATGGAGCTGACTGTGCTGCAATCCTCTCCAATGGCGCTTGTTTTCAGCCCAACACTGTTAAAGATCACTGCAATTACGCTGTCAACAGTTATTTCCAGCGAAAGGGGCAAGTCCAAGGAAGCTGTGACTTCAACGGCGCCGCCACGCCCAGCGTTACCCTCACTGCCTCTGTGCCCTCTGGTTGCGTCTATCCTTCTAGCCCCAGCAATGCGGGAACATCGCCGACGAACGGTGGAACTACGCCGACGAACGGTGGAACTACGCCGACGATGACACCAGGGACGCCGTCGACGACGACTCCAGGAATGACACCGACGGTGTTCGGTAACGGAATAAGCCCGAGTGGGAGCGGCACCGGGTTCAACGACGGTAGCGGCTGCGTGGGTTTCAATGAAAATAGGAACTTGCTTTTGGCAGTGGGGCTAACTCTGTGGCTTTCCGTATTGTTTCTCTGGGGATGA | 588 | 53.57 | MAVFVFFVFFLALTGRSCANYCLCRDGVGQSVLQKALDYACGNGADCAAILSNGACFQPNTVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNGGTTPTNGGTTPTMTPGTPSTTTPGMTPTVFGNGISPSGSGTGFNDGSGCVGFNENRNLLLAVGLTLWLSVLFLWG | 195 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 2322812 | 2324796 | - | MELO3C012149.2.1 | Cme10g00360 | 339246 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme10g00360 | 195 | MobiDBLite | consensus disorder prediction | 109 | 136 | - | - | |
| Cme10g00360 | 195 | SMART | X8_cls | 20 | 106 | IPR012946 | - | |
| Cme10g00360 | 195 | Pfam | X8 domain | 21 | 91 | IPR012946 | - | |
| Cme10g00360 | 195 | PANTHER | PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1 | 1 | 187 | - | - | |
| Cme10g00360 | 195 | PANTHER | BETA-1,3 GLUCANASE | 1 | 187 | IPR044788 | - | |
| Cme10g00360 | 195 | Gene3D | - | 17 | 108 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme03g01446 | Cme-Chr3:23789941 | Cme10g00360 | Cme-Chr10:2322812 | 1.05E-52 | dispersed | |
| Cme10g00360 | Cme-Chr10:2322812 | Cme04g00582 | Cme-Chr4:5333424 | 3.28E-20 | dispersed | |
| Cme10g00360 | Cme-Chr10:2322812 | Cme12g01948 | Cme-Chr12:25392192 | 3.05E-39 | wgd | |
| Cme10g00360 | Cme-Chr10:2322812 | Cme02g01836 | Cme-Chr2:25068447 | 4.54E-37 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme10g00360 | - | - | csv:101212531 | 311.227 |