Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00361 ATGGCTTCCATCACAAACATTATTCACTCTCCAATTCATTCACATCGGTTACCTTCCTTTCGATTGTTTCCTAATAGAACAGCTCCCGCAAATTCTTTGGTTCTCAAGCGTCGATCACTTGCTTCGCGTTTGAATTCCCCGTTGACGGAGAATCCAACTGTTTCGCCGTCGGTGGAACTATCTAACAAGGCTATTGGCCTTTTAAGTTTTAGAAAACCTTTAAAGTCTCGAAGTGATGTTCATCTGCCGGTGGTGAAGGCGGCTGCAGCTGATGCCGATGGAGCTTCCGATGGGTTGACTAGCCCTTCGAAGAGCTTTGGTGCAAGATTTCCAGCACTTATTACTGGATTCTACTTCTTTATGTGGTACTTTTTAAATGTTATTTTCAACATACTCAACAAAAAAGTTTACAATTATTTCCCATATCCATACTTTGTCTCTGTCATACATCTTCTTGTTGGAGTTGTATACTGTCTCGTTTCATGGGCTGTAGGTCTGCCAAAACGTGCCCCGATCGATAAGGAGCTCTTGCTATTATTGACTCCAGTTTCGCTATGTCATGCACTTGGACATGTGATGTCAAATGTTTCGTTTGCAGCTGTTGCTGTGTCCTTCACTCACACCATTAAAGCTCTGGAGCCATTCTTTAACGCTGCTGCTTCTCAATTCGTTTTGGGACATCAAATTCCCTTCAGCTTGTGGCTTTCTCTAGCACCTGTTGTTTTAGGTGTGTCAATGGCATCACTAACGGAACTTTCTTTCAATTGGACTGGCTTTGTTAGTGCAATGATTTCAAACATTGCATTTACCTATAGAAGTATATATTCGAAGAAAGCCATGACAGGAATGGACAGTACAAACGTGTATGCTTACACCTCAATAATTGCCCTTTTGTTTTGCATTCCTCCTGCAGTAATGATTGAGGGACCGCAATTGCTGCAGCATGGTTTTAAGGATGCCATTGCCAAAGTGGGTTTACAAAAGTTCTTGTCTGATCTTTTCTGGATCGGCATGTTTTATCATCTATACAATCAGCTTGCCGCCAACACTCTTGAACGTGTTGCACCATTAACACATGCTGTAGGAAACGTATTGAAGCGAGTTTTCGTGATTGGATTCTCCATTGTTGTTTTTGGCAACAGGATTTCAACTCAAACTGGAATTGGTACTGCTATAGCAATTGCCGGTGTCGCCATCTACTCCTTGATTAAAGCAAACTTGGAGGAGCAAAAACGGAGAGCTGCAAAAATTCCATCATCATAA 1263 41.96 MASITNIIHSPIHSHRLPSFRLFPNRTAPANSLVLKRRSLASRLNSPLTENPTVSPSVELSNKAIGLLSFRKPLKSRSDVHLPVVKAAAADADGASDGLTSPSKSFGARFPALITGFYFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDKELLLLLTPVSLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPFSLWLSLAPVVLGVSMASLTELSFNWTGFVSAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVMIEGPQLLQHGFKDAIAKVGLQKFLSDLFWIGMFYHLYNQLAANTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNRISTQTGIGTAIAIAGVAIYSLIKANLEEQKRRAAKIPSS 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2327877 2332158 - MELO3C012148.2.1 Cme10g00361 339247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00361 420 PANTHER SOLUTE CARRIER FAMILY 35 56 409 - -
Cme10g00361 420 PANTHER TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC-LIKE ISOFORM X1 56 409 - -
Cme10g00361 420 SUPERFAMILY Multidrug resistance efflux transporter EmrE 295 402 - -
Cme10g00361 420 Pfam Triose-phosphate Transporter family 115 401 IPR004853 -
Cme10g00361 420 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 113 411 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cme10g00361 420 SUPERFAMILY Multidrug resistance efflux transporter EmrE 157 250 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00272 Cme-Chr8:1752317 Cme10g00361 Cme-Chr10:2327877 0 dispersed
Cme08g00388 Cme-Chr8:2420777 Cme10g00361 Cme-Chr10:2327877 6.87E-80 dispersed
Cme10g00361 Cme-Chr10:2327877 Cme07g00856 Cme-Chr7:8494615 9.90E-20 dispersed
Cme10g00361 Cme-Chr10:2327877 Cme12g01691 Cme-Chr12:23801716 4.43E-59 transposed
Cme10g00361 Cme-Chr10:2327877 Cme09g00397 Cme-Chr9:3569311 8.11E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00361 K15283 - csv:101221040 761.14