Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00363 ATGTCGTCCGCCGAGAGGGAAAGAGAGACGCAGGTCTACATGGCCAAGCTTGCAGAACAGGCCGAACGCTACGACGAAATGGTGGAGTGTATGAAGAAAGTGGCTAAACTAGATGTTGAGCTAACAGTGGAAGAGAGAAACTTGCTATCTGTTGGATACAAAAATGTTATAGGTGCTAGGCGTGCTTCTTGGCGCATCATGTCCTCAATTGAACAGAAGGAAGAGTCCAAAAGCAATGAGAACAATGTTAAACTCATTAAGAGTTACCGTCAGAAGGTAGAGGAGGAGCTTTCCAAGATCTGTATCGATATTCTGACTATTATTGACAAGCACCTCATTCCTTCTTCAACCTCTTCAGAAGCATCGGTTTTCTACTACAAGATGAAAGGTGATTATTACCGATACCTTGCTGAGTTCAAAACAGATCAAGAAAGAAAGGAGGCAGCAGACCAGTCATTGAAGGGATATGAGACTGCTGCCAGCACCGCAAATACCGAACTTCCATCAACCCACCCAATCCGTCTTGGCCTTGCTCTCAACTTTTCTGTCTTCTACTATGAGATTATGAATTCCCCTGAAAGGGCTTGCCACTTAGCTAAACAAGCTTTTGACGAGGCAATTGCTGAATTGGATACTTTGAGTGAGGAATCATACAAGGACAGTACCCTCATAATGCAGTTGCTGAGAGATAACCTCACTCTCTGGACATCTGATTTACCAGAAGATGGAGGTGAAGATAACCTCAAAGGTGAGGATTCCAAACCGGCAGCACCAGCCCCTGAGCAGCATTAA 792 44.7 MSSAERERETQVYMAKLAEQAERYDEMVECMKKVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKSNENNVKLIKSYRQKVEEELSKICIDILTIIDKHLIPSSTSSEASVFYYKMKGDYYRYLAEFKTDQERKEAADQSLKGYETAASTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNLKGEDSKPAAPAPEQH 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2337132 2340006 - MELO3C012146.2.1 Cme10g00363 339249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00363 263 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Cme10g00363 263 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Cme10g00363 263 Gene3D - 1 249 IPR036815 -
Cme10g00363 263 MobiDBLite consensus disorder prediction 242 263 - -
Cme10g00363 263 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Cme10g00363 263 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Cme10g00363 263 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Cme10g00363 263 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Cme10g00363 263 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Cme10g00363 263 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Cme10g00363 263 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Cme10g00363 263 Coils Coil 196 216 - -
Cme10g00363 263 MobiDBLite consensus disorder prediction 238 263 - -
Cme10g00363 263 PIRSF 14-3-3 2 248 IPR000308 -
Cme10g00363 263 PANTHER 14-3-3 PROTEIN 4 255 IPR000308 -
Cme10g00363 263 Pfam 14-3-3 protein 14 236 IPR023410 -
Cme10g00363 263 PANTHER BNAC03G57490D PROTEIN 4 255 - -
Cme10g00363 263 SMART 1433_4 8 249 IPR023410 -
Cme10g00363 263 Coils Coil 14 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00322 Cme-Chr1:2433085 Cme10g00363 Cme-Chr10:2337132 5.00E-143 dispersed
Cme03g01448 Cme-Chr3:23809227 Cme10g00363 Cme-Chr10:2337132 4.51E-164 dispersed
Cme04g00285 Cme-Chr4:2243873 Cme10g00363 Cme-Chr10:2337132 1.04E-134 dispersed
Cme07g01081 Cme-Chr7:13451281 Cme10g00363 Cme-Chr10:2337132 1.52E-130 dispersed
Cme10g00363 Cme-Chr10:2337132 Cme03g01784 Cme-Chr3:26329881 3.00E-14 dispersed
Cme10g00363 Cme-Chr10:2337132 Cme03g01863 Cme-Chr3:26886991 1.46E-137 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00363 - K06630 csv:101221275 491.5