Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00373 ATGGCAACAATGACTTCCAAAGCTCTGCTTCTCACTTTCCTCTGTTTCTTCACCATCTCCTCTGCCGAATTCGTTAAAGTTTCAGTCAAAGGTGTCACCACCATTGCTCAAACTGACGACGACTTCATCTGTGCTACTTTAGATTGGTGGCCTCCTAATAAATGCGATTATGGCCAATGCCCATGGGGACTAGCTGGCATTCCTAATTTGGATCTTCAAAATATTATCTTGGCCAAAGCAATCAAGGAGTTCAATCCTTTGAGAATCCGAATTGGAGGGTCACTTCAAGATCAAATCATTTACAGAGTTGGAAACGGATATAAGAAGTGTCCTCGTATGAGGAAACTGAGTGAAGGTTTGTTTGGATTCAGCAAAGGATGTTTAACTATGCAACGATGGGATGAACTTAACGATTTGTTCAACAAAACATCAGCTCGGATTACATTTGGTTTAAATGCTTTAAAGGGTAAAAAACCAGCAAACGATGGAACTATCAATTGGGTTGGTGATTGGGATTCTCAAAATGCTCGTGACTTAATTCGTTACACTGCCTCTAAAGGATACAAAATCGATTCTTATGAACTTGGGAACGAGCTTTCTGCCACCGGAGTTTCGGCTAGGCTCGAGCCGGACCAATATGGTAAAGATTTGACAGTAATGGGGAAAATAGTTGAAGAAGTGTATCCTGATCCCACCAACAGACCCAAAATCTTGGGACCAGGTGGGTTCTTTGACAAAGAATGGTTCAGAGTCTTTCTTCAGAACACTGCACCAAATGTTGTTTATGGAGTCACTCACCACATTTACAATCTTGGAGCAGGTGTTGACCCTACACTTATAGATAAGGTTCAAGACCCTTATTATTTGGACCAAATTGCTCAAACATTTAAGGAAGCCAAGGAAGTTTCTGAGAGATTTGGGGCATGGTCTAAGCCTTGGATTGGTGAATCTGGTGGTGCTTATAACAGTGGTGGCAAAACTGTTTCTCATACTTTTGCTAATGGATTTTGGTATTTGGATAACTTGGGGATGACTGCATCATTCGATCATCAGGTTTATTGTAGACAAGCCTTGATTGGTGGAAACTATGCTTTGCTTAATACCACCACTTTCATCCCTAACCCTGATTACTATAGTGCTCTACTGTGGCACAGATTAATGGGGAAGAAGGTCTTGGCAGCATCCCACGACAGTTCTCCTTACCTTCGTGTTTATTCACATTGCACCAAAAACGAAGAAGGTGTAACTGTTCTTCTAATCAACCTCTCAAACTCGACAACACATGATGTGAAGATTGTAAACGACAGAAACATTTACCCAAATTTCGTAGGCAGCAAATTAAAAGCAAGAGAAGAGTATCATTTGACACCCAAAGACGGCGATATTCAAAGCGATGTTATGCTTTTAAATGGAACTCCTCTTCAGCTTACACCAACGTTGGACATCCCCAAAATGTCGCCCAAGCTTGTCGATCCCACTTCCGTTGTGACGGTTGCTCCTAGTTCTTATGTCTTCGTCTCCATCAAAGACTTCAAAGCTTCTGCTTGCGCCTAA 1554 41.76 MATMTSKALLLTFLCFFTISSAEFVKVSVKGVTTIAQTDDDFICATLDWWPPNKCDYGQCPWGLAGIPNLDLQNIILAKAIKEFNPLRIRIGGSLQDQIIYRVGNGYKKCPRMRKLSEGLFGFSKGCLTMQRWDELNDLFNKTSARITFGLNALKGKKPANDGTINWVGDWDSQNARDLIRYTASKGYKIDSYELGNELSATGVSARLEPDQYGKDLTVMGKIVEEVYPDPTNRPKILGPGGFFDKEWFRVFLQNTAPNVVYGVTHHIYNLGAGVDPTLIDKVQDPYYLDQIAQTFKEAKEVSERFGAWSKPWIGESGGAYNSGGKTVSHTFANGFWYLDNLGMTASFDHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGKKVLAASHDSSPYLRVYSHCTKNEEGVTVLLINLSNSTTHDVKIVNDRNIYPNFVGSKLKAREEYHLTPKDGDIQSDVMLLNGTPLQLTPTLDIPKMSPKLVDPTSVVTVAPSSYVFVSIKDFKASACA 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2392180 2394438 + MELO3C012138.2.1 Cme10g00373 339259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00373 517 Gene3D Glycosidases 64 385 - -
Cme10g00373 517 PANTHER OS07G0598400 PROTEIN 15 517 - -
Cme10g00373 517 Pfam Glycosyl hydrolase family 79, N-terminal domain 25 343 IPR005199 GO:0016020|GO:0016798
Cme10g00373 517 SUPERFAMILY (Trans)glycosidases 38 387 IPR017853 -
Cme10g00373 517 PANTHER HEPARANASE-RELATED 15 517 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g01890 Cme-Chr5:27643817 Cme10g00373 Cme-Chr10:2392180 1.68E-174 dispersed
Cme07g01701 Cme-Chr7:22549597 Cme10g00373 Cme-Chr10:2392180 7.73E-31 dispersed
Cme10g00373 Cme-Chr10:2392180 Cme12g01963 Cme-Chr12:25501940 0 wgd
Cme10g00373 Cme-Chr10:2392180 Cme02g01849 Cme-Chr2:25155965 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00373 K07964 - csv:101214214 1018.45