Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00377 ATGGGAACAAAGGTGCAGTATGAAAGTTATTTGCCAGGTTATCATTCAATGAGAGATCTAAATGAAGATTCTCATGGTTGTAGCTGGCCTTTATATTACAGTGAAAAATCATGTCAGAGTGGTCAATACTATAATGGAATTCTGCCAAGAGCTACCTCTGATGCATATCTAGGTTGTGATAGAGATGCTGTGAAGAGGACAATGCTCGAGCATGAAGCCATATTCAAGAACCAGGTTCGAGAGCTGCATCGGTTATATATAAAACAGAGAGAGTTAATGAATGATATTAAAAGATCAGAACAAAGACATCCAATACCGGTGGACATATCATTCTCATCTAGTCCTTTAGCATCTCAAAGTACTCCTGATGGTGCAAGGAAATGGCATCTCCCGAACTTTCCTCTTGCAATTTCTTCCAGTGGACCATCTGTACCTGGCGTTGAAGATGTAAAATCATCTTTAAGTTCTTTGAAAGAAAACAATAGAAGTGATGGTCTCTTACCATCCCAAAATGGAACTAGTTCGAAAGACTGTGAGGTACTAGAATCTAGACACTCAAATTCTAGGAGGAAAACTTTTGATCTTCAACTTCCAGCAGATGAGTACATTGATAGTGAAGAGGGGGAGGTATTTCACGATGAAAAAGTACCTCCTGCTCTGGGTTGCCATTCAAATGGCAGCAAGAAATTTGAGACTCAGAGTTGTGTGACAGCAAATTTGAATTTGAATCTCGAAGAAAAAAGTGGTGGTCAAAGTGCTGCTTTGAGATCCGACTCATGTTTATGGAACAGATATGGTTTGGCTGACTTAAATGAGCCTGTTCAGGTTGAAGAGGCAAATGGGTCCAATTTTTTTGATCTTCCTAGTGCTCGTGACTCCAGCAATGGGGAGACTCAAGGTCCCATTGTATCATCTGCAAAGCAAGAAAATTTTCTGAGCTCCAGTAATGAAGGTGGACATGCAACGAATAGGAATTCGTATATTGAGAATGGAAATAGAAGAGAGGCATTTCCTAACATCTTTGAAGCAGGACGTAGTAAGGAAAGTGAGAAATCTTTCACTCGTGGTCAGATGGAAAAATTCCATTTATCTTCTAATCCTTTGCAAGTTCCACTCAACAAGTATCATGAACTTCCAGTTTTCTATCTCAATGATAAAAGCAAGGTTCAACAAGATTTGGACAGGCCAGTTAGTGATTTGCAATTATTCAAAAGAAGTTTTGAAATGTCCAATGCTGGGGATCCTGGTTATGTTTTAGCTTCTCAGACATCTCGTACATATCAAATTGCTCCTTCTTTGGATGTTGGCAAGTCATGGGCTCACTCCAGTTCATCTTGGGAAAAGTCAAATGGCTCCCAGAAGACAACATCGGGTCATACACAGCCGTGCTTCAATTCGTCTGCTGCCGTTCACAAGAGTTTTCCTTCATCAACTCTGAACAATGGAATTTTTGGAGATAGATGGCATTTGAGTAGTGACTCTAGATCAAACCCTGGGTCTGGTTGCGAAAATCCCAACCAGAATGGATTCTATATCGGGTCTACGTCTGGTTCCAACGGTGTTCTCTCCTCTACTATAAGGCATGATCCTGGGGCAAACTATTACAAGGGCTCTGGTTGTGTCAGCACGAATTCTCCAAAAGATATTAACTTGAATGTAGTGCTTCAGAAAAGTTTATCAAATGAGTCAGGTCAACAACCAAACTACCGGACTAGAGAGTCAGAACAAAACAATGAGGACCATCATAATGTATTACCATGGTCAAGGGCTGTGCCTGCTGCTAGTAAGAATGAAACAATCAATTCAAGAAGATTCTCTGTGACTGGAGAGCTTAATTTTGCGCTCTCTCCGACAAAACAATTTTCTGATAGAAATGAAACTGAAAATGGCAGTAAAGTTGTATGTTATCCGAACATTGAGTCTAATTCACATTGTAGTAACAATGAGCCCAGAATGTCGGAACAGGGTGAATGCCAGAGTAACCGAAAACTTCTTGGGTTTCCCATTTTTGAAGGGCCACGCATTTCTAAGAATGAGTCGTTTTCTCTTACATCCCCATCAGCATCTCTTCCTAATCCATCTGAGAATGGAATGGAAGATAACAGGAAAACTAGAGTACTTGATATCAATTTGCCTTGTGATCCTTCAGTTTTTGAGTCGGACAACGCTACGAACGGAGCTCTGACTGTAGAGAATGGAAAGGACACAAAGATCTCTACTGTGAGAGTTGATATTGATTTGAACTCATGTGTCAGTGATGAAGAACCATCTATGAGACCCCTACCTTTGCCTTCTTCAAGTGGCAAGGAAAGGGTCATGGTAGAGATAGATTTAGAAGCCCCGGCAATGCCCGAGACTGAGGACAACATAATTGTAGAAGAAGAATCTTTAGTAAAACAGCATGAACAGCAACCACAATCCCTTCAGCACAAGGCTGTTGATATTCAGGATGATCTTATGTCTTTAGCAGCAGAGGCAATACTTGCCATCTCTTCTTGTGGTCATTCCTGTCTTTTGGATGATAGTGTTGTTAGCAATGGCTTGGAAGATTCTTCAAGCGACCCCCTAAATTGGTTTGCCGAGATAGTTTCCACACATGGAGATGATGTACAAACCAAGTCTGACACTGTATTGAGATCCAAAGAAGGCAAGGATGCTGAGGAATCCTCTTTGAGAGGGGTTGATTACTTCGAATACATGACTTTGAGGCAGGCGGAGGTTGATGAAGAACACTACATGCCTAAGCCTCTGGTTCCAGAAAATATGGAAATTGAAGATACCGGAACCAATTTGTTGCAAAATCGGCCCCGAAAGGGCCAGACGAGGAGAGGTCGGCAGAGAAGGGACTTCCAAAAGGACATCCTTCCAGGCCTGTCTTCTCTATCAAGGCATGAGGTTACGGAAGATCTTCAGACATTTGGTGGCCTAATGCGAGCAACAGGCCACTCTTGGCATTCCGGAGTTACGAGGAGGAACTCTACTAGAAACGGTTGTGGTAGGGGAAGACGAAGATCAGTAACGAGTCCCCCGCCCCCTGTGCAATCGGCTTGTAATCAGCTGATACAGCAACTAAGTAACATTGAAATGGGTCTAGAAGATGGAAGCCTGACTGGTTGGGGCAAGACAACTAGAAGGCCCCGTCGGCAGAGATGCCCGGCCGGTAACCCTCCGGCTGTTCCTTTAACTTAA 3189 42.52 MGTKVQYESYLPGYHSMRDLNEDSHGCSWPLYYSEKSCQSGQYYNGILPRATSDAYLGCDRDAVKRTMLEHEAIFKNQVRELHRLYIKQRELMNDIKRSEQRHPIPVDISFSSSPLASQSTPDGARKWHLPNFPLAISSSGPSVPGVEDVKSSLSSLKENNRSDGLLPSQNGTSSKDCEVLESRHSNSRRKTFDLQLPADEYIDSEEGEVFHDEKVPPALGCHSNGSKKFETQSCVTANLNLNLEEKSGGQSAALRSDSCLWNRYGLADLNEPVQVEEANGSNFFDLPSARDSSNGETQGPIVSSAKQENFLSSSNEGGHATNRNSYIENGNRREAFPNIFEAGRSKESEKSFTRGQMEKFHLSSNPLQVPLNKYHELPVFYLNDKSKVQQDLDRPVSDLQLFKRSFEMSNAGDPGYVLASQTSRTYQIAPSLDVGKSWAHSSSSWEKSNGSQKTTSGHTQPCFNSSAAVHKSFPSSTLNNGIFGDRWHLSSDSRSNPGSGCENPNQNGFYIGSTSGSNGVLSSTIRHDPGANYYKGSGCVSTNSPKDINLNVVLQKSLSNESGQQPNYRTRESEQNNEDHHNVLPWSRAVPAASKNETINSRRFSVTGELNFALSPTKQFSDRNETENGSKVVCYPNIESNSHCSNNEPRMSEQGECQSNRKLLGFPIFEGPRISKNESFSLTSPSASLPNPSENGMEDNRKTRVLDINLPCDPSVFESDNATNGALTVENGKDTKISTVRVDIDLNSCVSDEEPSMRPLPLPSSSGKERVMVEIDLEAPAMPETEDNIIVEEESLVKQHEQQPQSLQHKAVDIQDDLMSLAAEAILAISSCGHSCLLDDSVVSNGLEDSSSDPLNWFAEIVSTHGDDVQTKSDTVLRSKEGKDAEESSLRGVDYFEYMTLRQAEVDEEHYMPKPLVPENMEIEDTGTNLLQNRPRKGQTRRGRQRRDFQKDILPGLSSLSRHEVTEDLQTFGGLMRATGHSWHSGVTRRNSTRNGCGRGRRRSVTSPPPPVQSACNQLIQQLSNIEMGLEDGSLTGWGKTTRRPRRQRCPAGNPPAVPLT 1062
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2411609 2418546 - MELO3C012134.2.1 Cme10g00377 339263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00377 1062 MobiDBLite consensus disorder prediction 1032 1062 - -
Cme10g00377 1062 MobiDBLite consensus disorder prediction 985 1001 - -
Cme10g00377 1062 MobiDBLite consensus disorder prediction 983 1015 - -
Cme10g00377 1062 MobiDBLite consensus disorder prediction 283 302 - -
Cme10g00377 1062 MobiDBLite consensus disorder prediction 444 464 - -
Cme10g00377 1062 MobiDBLite consensus disorder prediction 145 177 - -
Cme10g00377 1062 MobiDBLite consensus disorder prediction 558 580 - -
Cme10g00377 1062 MobiDBLite consensus disorder prediction 286 302 - -
Cme10g00377 1062 MobiDBLite consensus disorder prediction 678 697 - -
Cme10g00377 1062 MobiDBLite consensus disorder prediction 312 331 - -
Cme10g00377 1062 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 1 1061 - -
Cme10g00377 1062 MobiDBLite consensus disorder prediction 558 572 - -
Cme10g00377 1062 Pfam Plant protein of unknown function (DUF863) 141 1052 IPR008581 -
Cme10g00377 1062 MobiDBLite consensus disorder prediction 139 183 - -
Cme10g00377 1062 PANTHER - 1 1061 - -
Cme10g00377 1062 MobiDBLite consensus disorder prediction 490 513 - -
Cme10g00377 1062 MobiDBLite consensus disorder prediction 678 699 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01435 Cme-Chr3:23717753 Cme10g00377 Cme-Chr10:2411609 0 dispersed
Cme10g00377 Cme-Chr10:2411609 Cme09g01642 Cme-Chr9:21154004 7.66E-08 dispersed
Cme02g01584 Cme-Chr2:22905987 Cme10g00377 Cme-Chr10:2411609 4.31E-08 transposed
Cme10g00377 Cme-Chr10:2411609 Cme12g01967 Cme-Chr12:25521883 5.24E-27 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00377 - - csv:105435576 1964.89