Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00393 ATGACGAGGGCTTTTAGAAGACGAACTTCGTATACAAGGCCTATAGATCGCTTCCGATTCCGAGCATCGGCGGACGGTGCTACGAAATCTGGATTCATCAGAGATATGAAGCTGAAGGAGATCTTGACTCCTTTGTTTATTGGTCTTCCGTTGGTTGTTTTTGTCGTTTTGGTGTTTAGGAATTCAACGGTGGATCTTTCCGTGGGTTTTGCTGAAGCCAGAGCATTGGAAAGAGTTCCCAATAATGGGGGTTCTGAGAGTTCAGGTTCAGAAAACGGATCCGCTCGACTTTCCAGTGGAGAGAAACTTATTGGAGGACTTCTAATTCCTGGATTTGATGAAGGATCGTGCTTGAGTAGATATCGGTCCAGTTTATATCGAAGAACTTCAACCCACAAACCTTCTTTGTATCTCCTCTCGATGCTTAGAGACTACGAAGCACTTCATCGACGGTGTGGTCCCCATACAAAACCATATGATGAAGCAGTAGAGCAACTTAAATCTGGTAATAGTGTTAGTTTGACAGAGTGTAAATATGTTGTGTGGATGTCTTATAGTGGCTTGGGAAACAAGATACTCACTTTGGCTTCTGCATTCCTCTATGCCCTCCTTACCAATCGTGTTTTGCTTGTTGATGGGGGTAAGGATATGGCAGATCTATTTTGTGAGCCCTTCCCAGAAAAATCTTGGTTACTACCAAATGACTTCCCCTTGGTGGATCAATTCGGCAACTTCGATTCAAAATCTCCTAATTGTCATGGAAATATGCTTAAGATGAACACTCTAAATACGTCAATAGAATCAGTCCCATCCTATCTATACCTACATTTGGCTCATGATTATGATGATCACGACAAGCTGTTTTTTTGTGATCAAGAACAGGCTCTTTTAGATAGGGTCCCGTGGCTTATACTGAAGACAGATAACTACTTTGTTCCATCTCTCTTCTTGATCCCATCTTTTGAGCACAAACTGAGTAACTTATTCCTGCAAAAAGACACCATCTTCCATCATCTAGGCCGTTATCTTTTCCACCCATCAAATCATGTTTGGGGTCTAATAACAAGATACTACGAAGCATATCTAGCAAGTGCAGATGAAAGAATAGGAATTCAAGTAAGAGTGTTCGAGAGTGAACCGGGGCCATTCCAACATGTAATGGATCAAATTTTAGGCTGTACACTTAAGGAGAAGCTACTGCCTGAGGTAGACAAGGAAGGCTCCTCTTCTGTGCCTCTGGAACGCCCGAGAGTGAAAGCTGTTTTGATGACATCTTTAAGTTCTGGATACTATGAACAATTGAGAACCTTGTACTGGGAATACCCGACTAAGACCGGAGATGTCATTACAGTTTATCAGCCAAGCTACGAAATGTATCAGCAGACAGAGAAGAAGACTCACAATAGGAAAGCATGGGCAGAAATTTACCTTCTGAGTTTGAGCGATGTATTGGTGACCAGTGCATGGTCAACATTCGGGTATGTGGCTCAAGGGCTCAGTGGATCGAAGCCATGGATTCTTTACAAGGCTGAGAACATGACCACGCCCAATCCACCATGTCGTAGGGCGATGTCAATGGAGCCTTGTTTTCATGCTCCGCCATTCTATGACTGCAAAGCAAAGAAAGGAATAGATACAGGTAAAGTTGTTCCCCATGTAAGACATTGTGAAGACATGAGCTGGGGGCTTAAGCTTGTTCACCATGAGGATTTATAA 1716 42.95 MTRAFRRRTSYTRPIDRFRFRASADGATKSGFIRDMKLKEILTPLFIGLPLVVFVVLVFRNSTVDLSVGFAEARALERVPNNGGSESSGSENGSARLSSGEKLIGGLLIPGFDEGSCLSRYRSSLYRRTSTHKPSLYLLSMLRDYEALHRRCGPHTKPYDEAVEQLKSGNSVSLTECKYVVWMSYSGLGNKILTLASAFLYALLTNRVLLVDGGKDMADLFCEPFPEKSWLLPNDFPLVDQFGNFDSKSPNCHGNMLKMNTLNTSIESVPSYLYLHLAHDYDDHDKLFFCDQEQALLDRVPWLILKTDNYFVPSLFLIPSFEHKLSNLFLQKDTIFHHLGRYLFHPSNHVWGLITRYYEAYLASADERIGIQVRVFESEPGPFQHVMDQILGCTLKEKLLPEVDKEGSSSVPLERPRVKAVLMTSLSSGYYEQLRTLYWEYPTKTGDVITVYQPSYEMYQQTEKKTHNRKAWAEIYLLSLSDVLVTSAWSTFGYVAQGLSGSKPWILYKAENMTTPNPPCRRAMSMEPCFHAPPFYDCKAKKGIDTGKVVPHVRHCEDMSWGLKLVHHEDL 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2530034 2533017 + MELO3C012118.2.1 Cme10g00393 339279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00393 571 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 6 570 - -
Cme10g00393 571 PANTHER FUCOSYLTRANSFERASE 2-RELATED 6 570 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cme10g00393 571 Pfam Xyloglucan fucosyltransferase 98 539 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cme10g00393 571 Gene3D - 174 224 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01442 Cme-Chr7:20116417 Cme10g00393 Cme-Chr10:2530034 0 transposed
Cme10g00393 Cme-Chr10:2530034 Cme12g01977 Cme-Chr12:25573140 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00393 K13681 - csv:101216541 1072.0