Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00485 GAAGGGAAGGGAAGGCCGGGAAACATTGAAGAGAAACAACAACTAACTGCTCACTTTGAAACTGTCAGCCACCAAACTCCAAAACATAAACACATAAACAAATGTTTTCTTTACAATCATTCTCTTCTCTTCCAAACTTTCCATTTTCTCCCCAGCTTCATTTCTCTCTGTTTCTCATCTCTTAATCCTTCCATGGATTCTATGCTTCACCTTCGCCTTCATCCATGGCACCTTAATCTCTTCCTCTTCTTCCTCTCTCTTTCCCCTCTTTGTTACTGCCAACTCAACCCCCCTCAAAATATCGAAACTTTCTACCCTCCATTTATTCCTCAGCCACCGTCCCCGTCCTCTTCTTCACTTGACCATCCGCCGTCATCCACGTCGACCAAGACCATCGCCACCGCGGTGGCCGTCACTGCAGTGGGTGTTGCTCTGATTTCCACCTTGTTCTTCTTTTTAATACAGAAATATGTTATCGGAAGAAAGAGAAAAACAGAGGAGGTAAATTCAGGGACGGGTTCGGGTTTGGTAGTGCCGCCGGCGGTTGCTCAGAGTGAATTTTCGCGGGTTGATGGGAATCTTAAAGGGTTTATTGTGGATGAAAATGGGTTGGATGTGATTTATTGGAAGAGACTTGAAAAAAGGAAATCCAAAAATAGCTTTGATCGGGATGTTGAAGGTAATGTTAAGGAAAACAGAAACAAAAAGTCAGAGCCTGTTCAAGAAATTCCTCTGCTTCGAGGAAAATCTTCAACTTCGCATGTTAAAATTGCACCCGAAGATGAAGACGATACTCGGATTACATCGTCATCGCCCCCTCCGCCGCCCCATATTAACCAACCTCCGCAATTTGCTGGGAATTCTGTTCAGGCTGTTGGAAAATCACCAAGTAGTTCAAATCTTTCATCAACGGCACCACCGCAATCGACGGATAATCAAGTACCTCCCACACAATCTCCAATGGCCGTTCCGCCACCGCCCCCACCTATTCCAGCCAAGACTAATTCAAGACTGCCGCCGCCTCCACCTCCCATTCCCAAGACCAATTCAAGACCACCACCACCGCCGCCGCCTATTCAAACGAAGACCAACTCAGCAGGACCACCTCCCCCTCCTATACCGGCCAAGGCAAATCCGTCAGCACCACCGCCACCACCGCCCAAGGCCGGCGGTTCAAAATTACCCTTAAGGCCTGCACCTCCAAAGGAGAGTAACAAATCTTCTGGAGAGGCTTCTTCATCAGCCGACAATGGTCAGGTTAAAATGAAGCCCCTGCATTGGGATAAAGTGAACACTGCCAATGCCGATCATTCCATGGTTTGGGACAAAATGAGCGCCGGTTCTTTCAAATTCGATGGGGATCTTATGGAAGCTCTGTTTGGATATGTTGCAACCAACCGGAAATCCCCCCGGAGTGAAGCTAGTTCTTCAGCAAACGCCGTTGGCCGGAACTCGGGGCCGTCGCAAACTTTCATTCTTGAACCGAAAAAATCTCAGAACATAGCCATTGTAATCAAGTCCTTAACAGTTCCTCGCAACGAAATCCTCGATGCGCTCAACGAAGGTCATGGCCTGGAAACAGAGGTTCTTGAAAAACTCACAAGAATTGCTCTGACTCAAGAAGAAATTTCCCAAATTCTTGCTTACAGAGGAGATCCCCAGAAGCTAGCTGATGCTGAATCGTTCCTTTACCATCTTCTCAAATCGGTTCCATCGGCGTTTACGCGCTTCAACGCCATGCTTTTCCGATTGAATTTTACATCAGAGATTCTCCATCTCAAGGAATCTCTACAAACTCTGGAATCCGCTTGCAAGGAGCTTAGAACAAGAGGATTGTTTATGAAACTTCTTGAAGCAATTCTTAAAGCTGGAAACCGGTTGAATGCAGGAACTGCAAGAGGAAATGCCAGAGCTTTCAATCTTACAGCTCTTCGAAAGCTCTCTGATGTTCGAAGCACTGATGGTAAAACCACTTTGCTTCATTTTGTAGTCCAGGAAGTGATCAGGGCAGAAGGGAAAAGGTGTGTTTTAAACAGGAACAAGAGCTTGAGTCGTAATAGTAGCCGTAGCAGCGATAATAGCTTTAGCAGCTTAGAAAACTCGACTGCGAAGGAGGACAAAGTGAAGGAATACATGATGTTGGGATTGCCGGTGGTGGGAGGTCTAAGCTCCGAATTCTCTCATGTAAAGAAAGCGTCAGCAATCGACTACGAGAGCTTCGTTAAGGCTGGGACGTCCCTGACTAGTCGAACCGAAGAAATCCGGAAGCTCTTGACTCAAATGGGGAACAACGAAGGTGGGTTTACGAAGGAAATGAGAGAATTTCTTGACGCATCAGAGGATGAGCTGAAGAAGGTGAGAGAAGAACAAACGAAGGTGATGGATTTAGTGATGAAGACAACAGAGTATTATCAGGCAGGAAGTTCTAAAGATAAAGAAACAAATCGGCTTCAATTATTTATTATAATTAAAGATTTTCTAGAAATGGTAGATCGAGTTTGTGTTGAAATTACTCGAGATCTCCAGAGGAAGAGATCGTCAGCAGTAAATGCAGGTTCCAGTTCGGGTTCGGGTTCTTCCCCGGGAAGATCAAAAGCAATTTTCCATAACTTGCCGGAAAATTTTATGTCAGACAAGTCTAGAGGGAGTTCTAGTGATACAGATGATGAATTCTGA 2676 45.63 EGKGRPGNIEEKQQLTAHFETVSHQTPKHKHINKCFLYNHSLLFQTFHFLPSFISLCFSSLNPSMDSMLHLRLHPWHLNLFLFFLSLSPLCYCQLNPPQNIETFYPPFIPQPPSPSSSSLDHPPSSTSTKTIATAVAVTAVGVALISTLFFFLIQKYVIGRKRKTEEVNSGTGSGLVVPPAVAQSEFSRVDGNLKGFIVDENGLDVIYWKRLEKRKSKNSFDRDVEGNVKENRNKKSEPVQEIPLLRGKSSTSHVKIAPEDEDDTRITSSSPPPPPHINQPPQFAGNSVQAVGKSPSSSNLSSTAPPQSTDNQVPPTQSPMAVPPPPPPIPAKTNSRLPPPPPPIPKTNSRPPPPPPPIQTKTNSAGPPPPPIPAKANPSAPPPPPPKAGGSKLPLRPAPPKESNKSSGEASSSADNGQVKMKPLHWDKVNTANADHSMVWDKMSAGSFKFDGDLMEALFGYVATNRKSPRSEASSSANAVGRNSGPSQTFILEPKKSQNIAIVIKSLTVPRNEILDALNEGHGLETEVLEKLTRIALTQEEISQILAYRGDPQKLADAESFLYHLLKSVPSAFTRFNAMLFRLNFTSEILHLKESLQTLESACKELRTRGLFMKLLEAILKAGNRLNAGTARGNARAFNLTALRKLSDVRSTDGKTTLLHFVVQEVIRAEGKRCVLNRNKSLSRNSSRSSDNSFSSLENSTAKEDKVKEYMMLGLPVVGGLSSEFSHVKKASAIDYESFVKAGTSLTSRTEEIRKLLTQMGNNEGGFTKEMREFLDASEDELKKVREEQTKVMDLVMKTTEYYQAGSSKDKETNRLQLFIIIKDFLEMVDRVCVEITRDLQRKRSSAVNAGSSSGSGSSPGRSKAIFHNLPENFMSDKSRGSSSDTDDEF 891
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3114817 3117773 - MELO3C012032.2.1 Cme10g00485 339371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00485 891 MobiDBLite consensus disorder prediction 845 864 - -
Cme10g00485 891 MobiDBLite consensus disorder prediction 845 891 - -
Cme10g00485 891 Coils Coil 769 789 - -
Cme10g00485 891 SMART it6_source 412 845 IPR015425 -
Cme10g00485 891 MobiDBLite consensus disorder prediction 467 491 - -
Cme10g00485 891 ProSiteProfiles Formin homology-2 (FH2) domain profile. 412 856 IPR015425 -
Cme10g00485 891 PANTHER FORMIN-LIKE PROTEIN 4 77 360 - -
Cme10g00485 891 PANTHER FORMIN-LIKE PROTEIN 4 350 887 - -
Cme10g00485 891 MobiDBLite consensus disorder prediction 468 491 - -
Cme10g00485 891 MobiDBLite consensus disorder prediction 219 420 - -
Cme10g00485 891 MobiDBLite consensus disorder prediction 282 317 - -
Cme10g00485 891 MobiDBLite consensus disorder prediction 682 701 - -
Cme10g00485 891 Pfam Formin Homology 2 Domain 415 831 IPR015425 -
Cme10g00485 891 Coils Coil 590 610 - -
Cme10g00485 891 MobiDBLite consensus disorder prediction 405 419 - -
Cme10g00485 891 Gene3D Formin, FH2 domain 432 853 IPR042201 -
Cme10g00485 891 MobiDBLite consensus disorder prediction 318 394 - -
Cme10g00485 891 MobiDBLite consensus disorder prediction 219 242 - -
Cme10g00485 891 SUPERFAMILY Formin homology 2 domain (FH2 domain) 488 844 - -
Cme10g00485 891 PANTHER FORMIN-RELATED 350 887 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cme10g00485 891 PANTHER FORMIN-RELATED 77 360 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01290 Cme-Chr3:22471660 Cme10g00485 Cme-Chr10:3114817 2.02E-13 dispersed
Cme10g00485 Cme-Chr10:3114817 Cme11g00355 Cme-Chr11:3644288 5.93E-95 dispersed
Cme10g00485 Cme-Chr10:3114817 Cme12g01971 Cme-Chr12:25543931 7.65E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00485 - - csv:101208197 1239.94