Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme10g00508 | ATGGCATCAAGATCTACCGCTAATTTTTTGGACCTGGCTTCTGGAGATTTACTGGATGTTCCTCGTACACCCAAGTCCCTGCCACGGGTAATGACTGCTCCTGGAATTATTTCTGAATTAGATGATTATGGGAGTAATGACGGAGACTCGGAGTCTTCATCTGTATACCGTGAGCGCAAAATCATAGTTGCAAATATGTTACCTTTGCACGCTAAAAAAGATGGGCAATCTGGCAAATGGTGCTTCAGTTTAGATGAGGATTCAATTTTATTGCAGCTAAAGAATGGTTTTTCACCTGAGATGGAGGTTATATACATTGGTTCCCTCAAGGTTGAAATCGACCCCAGCGAGCAGGAGGAGGTTGCTCAGAAACTGTTCGACAATTTTAACTGTGTACCTACATTTCTTCCTCATGATCTCCAGAAGAACTTTTATATTGGGTTTTGCAAACAGCAGTTATGGCCCTTATTCCATTACATGCTACCCATGTGCCCAGAGCATGGTGATCGCTTTGATCGGCAGCTTTGGCAAGCCTATGTTTCTGCGAACAAACTATTTGCTGATAAGGTGATGGAAATCATCAATCCTGAGGAAGATTCTGTTTGGGTTCATGATTATCATTTAATGGTTCTTCCTACATTTCTGAGGAAGCGCTACAATCGAGTTAAACTTGGATTTTTCCTGCATAGCCCGTTTCCATCATCAGAAATCTATCGAACTTTACCAGTTCGGGATGAGATTCTCCGTGGCCTGTTGAACTGTGATTTACTTGGTTTTCATACGTTTGATTATGCCCGTCACTTCCTCTCATGCTGCAGCAGAATGTTGGGCTTGGATTATGAATCTAAGCGTGGTCATATTGGACTAGATTATTATGGTCGCACGGTATATATCAAAATTCTGCCTGTAGGCATTCACATGGGTCGGCTGGAATCAGTGATGAATCTTCCATCTACATTTGCTAAAGTCAAAGAAATTCGAGATCAGTTCATGGGGAAGAAATTAATTCTTGGTATTGATGATATGGACATTTTTAAGGGTATAAGCCTGAAGCTTCTTGCTGTGGAACAGCTTTTACGGCAACATCCTGCGTTGCGAGGCAAAATAGTCCTGGTTCAAATAGTGAACCCTGCAAGGGGTTCGGGGAAAGATGTGCATGAAGCTCAGAAGGAAGCCTACCTGGCTGCAGAAAGGATCAATGAAGCTTACGGTTCAAGTAACTACAAACCAGTAATTCTGATTGATCGCCCCGTCCCACGTTTTGAGAAGACTGCTTATTATGCTTTAGCAGAATGCTGCATAGTGAGTGCTGTAAGGGATGGCATGAATTTGGTTCCATACAAGTATATTGTTTGTAGGCAATCAACTCCTCTCATGGATGAGGCTCTGGGCTTACAAATTGGTTCTCCTAGAACGAGTATGCTTGTGGTGTCTGAATTTATTGGTTGCTCACCTTCTTTAAGTGGAGCAATCAGAGTTAATCCTTGGGACATTGATGCTGTTGCCGATGCATTGGAACTAGCCATAACCATGCAGGAGTCAGAGAAGCAGCTGCGACATGAGAAACATTATCGATATGTCAGTTCCCACGATATTGGATATTGGTCTCGTAGTTTTATGCAAGATTTGGACAGAGCATGTCAAGATCACTATAGTAAACGGTGCTGGGGAATTGGTTTGGGTCTGCGTTTTAGAGTTGTTTCTCTTTCTCCTGGGTTTAGGAAGTTAACTATCGATCACATTGTCTCGGCTTATAAAAGAACTCATAGAAGAGCAATATTTTTAGATTATGATGGCACTATCATTTCACAAAGCTCTATAATTAAGACACCGAGCCCTGAAGTTATCTCAGTCTTGACTACTCTTTGCAATGATCCCTGTAACACTGTGTTCATTGTTAGTGGGAGGGGGAGAAGTTCTTTAGGTCAGTGGTTCGTCTCTTGTGAGATGTTGGGGATTGCAGCGGAACATGGGTACTTCATAAGGTGGGGTGGAACTTCAGAATGGGAAACTAGTCCACTGTCTTCTGATCTTGATTGGATTAAAATTGTAGAGCCAGTGATGAGATTATATACGGAAGCAACAGATGGCTCGTGCATAGAACAGAAAGAAAGTGCTTTAGTCTGGCATCATCAAGATGCTGATTCTGACTTCGGATCCTGTCAAGCCAAGGAATTGCTGGACCATCTAGAAAACGTACTTGCCAATGAACCAGCGGTTGTTAAAAGAGGCCAACATATTGTTGAAGTGAAGCCACAGGGAGTAAGCAAAGGGTTGGTCGCAGAAAAGGTTCTCTCAAGAATGGTGGATAGTGGAAGACCACCTGATTTCGTGATGTGCATTGGAGATGATAGATCAGATGAAGATATGTTTGAGAGCATATTAAGTACCGTCTCCAGTCCTTCACTCCCTTCCGCTCCAGAAATCTTTGCCTGTACTGTTGGACGAAAGCCAAGCAAGGCTAAGTTTTACCTCGATGATACTTCCGACGTCGTAAAATTGCTGCAATGCCTTGCCTCGTCATCACGTCCAAGACCCCGACAACTACCACAGATGCGTGTTTCTTTCGAGAGTGTTTTCTAA | 2583 | 42.93 | MASRSTANFLDLASGDLLDVPRTPKSLPRVMTAPGIISELDDYGSNDGDSESSSVYRERKIIVANMLPLHAKKDGQSGKWCFSLDEDSILLQLKNGFSPEMEVIYIGSLKVEIDPSEQEEVAQKLFDNFNCVPTFLPHDLQKNFYIGFCKQQLWPLFHYMLPMCPEHGDRFDRQLWQAYVSANKLFADKVMEIINPEEDSVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLLGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYYGRTVYIKILPVGIHMGRLESVMNLPSTFAKVKEIRDQFMGKKLILGIDDMDIFKGISLKLLAVEQLLRQHPALRGKIVLVQIVNPARGSGKDVHEAQKEAYLAAERINEAYGSSNYKPVILIDRPVPRFEKTAYYALAECCIVSAVRDGMNLVPYKYIVCRQSTPLMDEALGLQIGSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALELAITMQESEKQLRHEKHYRYVSSHDIGYWSRSFMQDLDRACQDHYSKRCWGIGLGLRFRVVSLSPGFRKLTIDHIVSAYKRTHRRAIFLDYDGTIISQSSIIKTPSPEVISVLTTLCNDPCNTVFIVSGRGRSSLGQWFVSCEMLGIAAEHGYFIRWGGTSEWETSPLSSDLDWIKIVEPVMRLYTEATDGSCIEQKESALVWHHQDADSDFGSCQAKELLDHLENVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLSRMVDSGRPPDFVMCIGDDRSDEDMFESILSTVSSPSLPSAPEIFACTVGRKPSKAKFYLDDTSDVVKLLQCLASSSRPRPRQLPQMRVSFESVF | 860 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3271116 | 3276812 | - | MELO3C012010.2.1 | Cme10g00508 | 339394 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme10g00508 | 860 | Gene3D | Glycogen Phosphorylase B; | 52 | 311 | - | - | |
Cme10g00508 | 860 | Pfam | Glycosyltransferase family 20 | 59 | 544 | IPR001830 | GO:0003824|GO:0005992 | |
Cme10g00508 | 860 | Gene3D | Glycogen Phosphorylase B; | 312 | 528 | - | - | |
Cme10g00508 | 860 | Gene3D | - | 590 | 717 | IPR023214 | - | |
Cme10g00508 | 860 | Gene3D | - | 719 | 848 | IPR023214 | - | |
Cme10g00508 | 860 | CDD | GT20_TPS | 59 | 543 | IPR001830 | GO:0003824|GO:0005992 | |
Cme10g00508 | 860 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 59 | 548 | - | - | |
Cme10g00508 | 860 | CDD | HAD_TPP | 592 | 833 | - | - | |
Cme10g00508 | 860 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 1 | 847 | IPR001830 | GO:0003824|GO:0005992 | |
Cme10g00508 | 860 | TIGRFAM | HAD-SF-IIB: HAD hydrolase, family IIB | 592 | 793 | IPR006379 | - | |
Cme10g00508 | 860 | TIGRFAM | T6PP: trehalose-phosphatase | 589 | 839 | IPR003337 | GO:0003824|GO:0005992 | |
Cme10g00508 | 860 | SUPERFAMILY | HAD-like | 591 | 839 | IPR036412 | - | |
Cme10g00508 | 860 | Pfam | Trehalose-phosphatase | 594 | 829 | IPR003337 | GO:0003824|GO:0005992 | |
Cme10g00508 | 860 | PANTHER | ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED | 1 | 847 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme10g00508 | Cme-Chr10:3271116 | Cme08g00781 | Cme-Chr8:5206986 | 1.66E-06 | dispersed | |
Cme01g00311 | Cme-Chr1:2318897 | Cme10g00508 | Cme-Chr10:3271116 | 0 | transposed | |
Cme06g02456 | Cme-Chr6:31591146 | Cme10g00508 | Cme-Chr10:3271116 | 0 | transposed | |
Cme07g00497 | Cme-Chr7:4052377 | Cme10g00508 | Cme-Chr10:3271116 | 3.26E-128 | transposed | |
Cme08g00207 | Cme-Chr8:1392770 | Cme10g00508 | Cme-Chr10:3271116 | 0 | transposed | |
Cme12g01248 | Cme-Chr12:20614503 | Cme10g00508 | Cme-Chr10:3271116 | 1.32E-131 | transposed | |
Cme10g00508 | Cme-Chr10:3271116 | Cme02g01956 | Cme-Chr2:25829505 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme10g00508 | K16055 | - | csv:101212688 | 1731.84 |