Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00508 ATGGCATCAAGATCTACCGCTAATTTTTTGGACCTGGCTTCTGGAGATTTACTGGATGTTCCTCGTACACCCAAGTCCCTGCCACGGGTAATGACTGCTCCTGGAATTATTTCTGAATTAGATGATTATGGGAGTAATGACGGAGACTCGGAGTCTTCATCTGTATACCGTGAGCGCAAAATCATAGTTGCAAATATGTTACCTTTGCACGCTAAAAAAGATGGGCAATCTGGCAAATGGTGCTTCAGTTTAGATGAGGATTCAATTTTATTGCAGCTAAAGAATGGTTTTTCACCTGAGATGGAGGTTATATACATTGGTTCCCTCAAGGTTGAAATCGACCCCAGCGAGCAGGAGGAGGTTGCTCAGAAACTGTTCGACAATTTTAACTGTGTACCTACATTTCTTCCTCATGATCTCCAGAAGAACTTTTATATTGGGTTTTGCAAACAGCAGTTATGGCCCTTATTCCATTACATGCTACCCATGTGCCCAGAGCATGGTGATCGCTTTGATCGGCAGCTTTGGCAAGCCTATGTTTCTGCGAACAAACTATTTGCTGATAAGGTGATGGAAATCATCAATCCTGAGGAAGATTCTGTTTGGGTTCATGATTATCATTTAATGGTTCTTCCTACATTTCTGAGGAAGCGCTACAATCGAGTTAAACTTGGATTTTTCCTGCATAGCCCGTTTCCATCATCAGAAATCTATCGAACTTTACCAGTTCGGGATGAGATTCTCCGTGGCCTGTTGAACTGTGATTTACTTGGTTTTCATACGTTTGATTATGCCCGTCACTTCCTCTCATGCTGCAGCAGAATGTTGGGCTTGGATTATGAATCTAAGCGTGGTCATATTGGACTAGATTATTATGGTCGCACGGTATATATCAAAATTCTGCCTGTAGGCATTCACATGGGTCGGCTGGAATCAGTGATGAATCTTCCATCTACATTTGCTAAAGTCAAAGAAATTCGAGATCAGTTCATGGGGAAGAAATTAATTCTTGGTATTGATGATATGGACATTTTTAAGGGTATAAGCCTGAAGCTTCTTGCTGTGGAACAGCTTTTACGGCAACATCCTGCGTTGCGAGGCAAAATAGTCCTGGTTCAAATAGTGAACCCTGCAAGGGGTTCGGGGAAAGATGTGCATGAAGCTCAGAAGGAAGCCTACCTGGCTGCAGAAAGGATCAATGAAGCTTACGGTTCAAGTAACTACAAACCAGTAATTCTGATTGATCGCCCCGTCCCACGTTTTGAGAAGACTGCTTATTATGCTTTAGCAGAATGCTGCATAGTGAGTGCTGTAAGGGATGGCATGAATTTGGTTCCATACAAGTATATTGTTTGTAGGCAATCAACTCCTCTCATGGATGAGGCTCTGGGCTTACAAATTGGTTCTCCTAGAACGAGTATGCTTGTGGTGTCTGAATTTATTGGTTGCTCACCTTCTTTAAGTGGAGCAATCAGAGTTAATCCTTGGGACATTGATGCTGTTGCCGATGCATTGGAACTAGCCATAACCATGCAGGAGTCAGAGAAGCAGCTGCGACATGAGAAACATTATCGATATGTCAGTTCCCACGATATTGGATATTGGTCTCGTAGTTTTATGCAAGATTTGGACAGAGCATGTCAAGATCACTATAGTAAACGGTGCTGGGGAATTGGTTTGGGTCTGCGTTTTAGAGTTGTTTCTCTTTCTCCTGGGTTTAGGAAGTTAACTATCGATCACATTGTCTCGGCTTATAAAAGAACTCATAGAAGAGCAATATTTTTAGATTATGATGGCACTATCATTTCACAAAGCTCTATAATTAAGACACCGAGCCCTGAAGTTATCTCAGTCTTGACTACTCTTTGCAATGATCCCTGTAACACTGTGTTCATTGTTAGTGGGAGGGGGAGAAGTTCTTTAGGTCAGTGGTTCGTCTCTTGTGAGATGTTGGGGATTGCAGCGGAACATGGGTACTTCATAAGGTGGGGTGGAACTTCAGAATGGGAAACTAGTCCACTGTCTTCTGATCTTGATTGGATTAAAATTGTAGAGCCAGTGATGAGATTATATACGGAAGCAACAGATGGCTCGTGCATAGAACAGAAAGAAAGTGCTTTAGTCTGGCATCATCAAGATGCTGATTCTGACTTCGGATCCTGTCAAGCCAAGGAATTGCTGGACCATCTAGAAAACGTACTTGCCAATGAACCAGCGGTTGTTAAAAGAGGCCAACATATTGTTGAAGTGAAGCCACAGGGAGTAAGCAAAGGGTTGGTCGCAGAAAAGGTTCTCTCAAGAATGGTGGATAGTGGAAGACCACCTGATTTCGTGATGTGCATTGGAGATGATAGATCAGATGAAGATATGTTTGAGAGCATATTAAGTACCGTCTCCAGTCCTTCACTCCCTTCCGCTCCAGAAATCTTTGCCTGTACTGTTGGACGAAAGCCAAGCAAGGCTAAGTTTTACCTCGATGATACTTCCGACGTCGTAAAATTGCTGCAATGCCTTGCCTCGTCATCACGTCCAAGACCCCGACAACTACCACAGATGCGTGTTTCTTTCGAGAGTGTTTTCTAA 2583 42.93 MASRSTANFLDLASGDLLDVPRTPKSLPRVMTAPGIISELDDYGSNDGDSESSSVYRERKIIVANMLPLHAKKDGQSGKWCFSLDEDSILLQLKNGFSPEMEVIYIGSLKVEIDPSEQEEVAQKLFDNFNCVPTFLPHDLQKNFYIGFCKQQLWPLFHYMLPMCPEHGDRFDRQLWQAYVSANKLFADKVMEIINPEEDSVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLLGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYYGRTVYIKILPVGIHMGRLESVMNLPSTFAKVKEIRDQFMGKKLILGIDDMDIFKGISLKLLAVEQLLRQHPALRGKIVLVQIVNPARGSGKDVHEAQKEAYLAAERINEAYGSSNYKPVILIDRPVPRFEKTAYYALAECCIVSAVRDGMNLVPYKYIVCRQSTPLMDEALGLQIGSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALELAITMQESEKQLRHEKHYRYVSSHDIGYWSRSFMQDLDRACQDHYSKRCWGIGLGLRFRVVSLSPGFRKLTIDHIVSAYKRTHRRAIFLDYDGTIISQSSIIKTPSPEVISVLTTLCNDPCNTVFIVSGRGRSSLGQWFVSCEMLGIAAEHGYFIRWGGTSEWETSPLSSDLDWIKIVEPVMRLYTEATDGSCIEQKESALVWHHQDADSDFGSCQAKELLDHLENVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLSRMVDSGRPPDFVMCIGDDRSDEDMFESILSTVSSPSLPSAPEIFACTVGRKPSKAKFYLDDTSDVVKLLQCLASSSRPRPRQLPQMRVSFESVF 860
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 3271116 3276812 - MELO3C012010.2.1 Cme10g00508 339394
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00508 860 Gene3D Glycogen Phosphorylase B; 52 311 - -
Cme10g00508 860 Pfam Glycosyltransferase family 20 59 544 IPR001830 GO:0003824|GO:0005992
Cme10g00508 860 Gene3D Glycogen Phosphorylase B; 312 528 - -
Cme10g00508 860 Gene3D - 590 717 IPR023214 -
Cme10g00508 860 Gene3D - 719 848 IPR023214 -
Cme10g00508 860 CDD GT20_TPS 59 543 IPR001830 GO:0003824|GO:0005992
Cme10g00508 860 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 548 - -
Cme10g00508 860 CDD HAD_TPP 592 833 - -
Cme10g00508 860 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 847 IPR001830 GO:0003824|GO:0005992
Cme10g00508 860 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 793 IPR006379 -
Cme10g00508 860 TIGRFAM T6PP: trehalose-phosphatase 589 839 IPR003337 GO:0003824|GO:0005992
Cme10g00508 860 SUPERFAMILY HAD-like 591 839 IPR036412 -
Cme10g00508 860 Pfam Trehalose-phosphatase 594 829 IPR003337 GO:0003824|GO:0005992
Cme10g00508 860 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 847 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00508 Cme-Chr10:3271116 Cme08g00781 Cme-Chr8:5206986 1.66E-06 dispersed
Cme01g00311 Cme-Chr1:2318897 Cme10g00508 Cme-Chr10:3271116 0 transposed
Cme06g02456 Cme-Chr6:31591146 Cme10g00508 Cme-Chr10:3271116 0 transposed
Cme07g00497 Cme-Chr7:4052377 Cme10g00508 Cme-Chr10:3271116 3.26E-128 transposed
Cme08g00207 Cme-Chr8:1392770 Cme10g00508 Cme-Chr10:3271116 0 transposed
Cme12g01248 Cme-Chr12:20614503 Cme10g00508 Cme-Chr10:3271116 1.32E-131 transposed
Cme10g00508 Cme-Chr10:3271116 Cme02g01956 Cme-Chr2:25829505 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00508 K16055 - csv:101212688 1731.84