Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00509 ATGGTTATGGATCTGGAAAGTGGAGTTGTTAGTGAAAAGAACGCGAAGAAAGATTCATGGAAGACGATTTTGATGATGGCTTATCAGAGTCTTGGGGTTGTTTATGGAGAGTTGGGAACTTCGCCTTTATATGTGTATAGGAACACTTTTGCAGAAGAAGATATAAGTCATTCCAAGAGCAACGATGAGATTTATGGGGTTTTGTCCTTTGTTTTCTGGACTCTCACCATTGTTCCTTTGCTCAAGTACATATTTATCGTTCTTAAAGCTGATGATAATGGGGAGGGTGGGACATTTGCTCTGTATTCGTTACTGTGTCGACATGCTCGAGTTAGCTCATTGCCTAATACCCAGTTGGCTGATTCTGAACTTACTGAGTATAAGATGAATGTCCTTGGTCCATCATCTCAACAAAGTTTTGGATTTAAACTCAAATCAGCACTAGAAAAGCGTCGGGTTCTGCAGAAATTCTTGCTTGTTCTTGCTTTAATTGGGACTTGCATGGTGATAGGGGATGGCATCTTAACACCAGCTATTTCTGATATAGTGATCCCAATTGCTTGCGTCGTACTGATATGCTTGTTTGCTCTTCAACACTATGGCACGCACAGGATCGGCTTCTTGTTTGCTCCCATAGTGATAGTTTGGCTATTGTGTATTAGTGTCATTGGCCTTTACAATATTATCCACTGGAATCCCCGTGTTTATAGAGCAATTTCTCCTCGTTACATGTTCCAATTTCTTAAGAAAACCCAAAAAGGAGGCTGGATGTCACTTGGTGGAATAATGTTGTGCATTACTGGTTCAGAGGCGATGTTTGCTGACCTTGGTCATTTTTCTCAGTTGTCAATTAAGATTGCTTTCACTTTTATGGTTTATCCATCTCTCCTCCTAGCATACATGGGGCAAGCTGCTTATCTGTCTCAACATCATCCCTCTTCAAATGAACATCCGATTGGGTTTTATGTATCTGTTCCTGATAAATTGAAGTGGCCTGTCCTTATAATTGCTGTGCTTGCAGCAGTAGTAGGAAGTCAGGCTATAATCACCGGAACTTTCTCGATTATAAAGCAGTGCTCTGCTTTGGGTTGCTTTCCTCGAGTCAAAATTATTCATACGTCTTCGAAAGTTCATGGTCAGATCTATATCCCAGAGGTCAATTGGATTTTGATGCTGTTGTGCTTGGCTGTTACCTTAGGTTTCAGAGACACTAAGCGCTTGGGCCATGCGTCAGGTTTGGCAGTGATAACTGTGATGCTTGTTACTACATGCTTGATGTCGCTCGTTATTGTCCTGTGCTGGCACCGAAGTGTATTTCTTGCAATAGGCTTCATCTTCTTCTTTGGCACAATTGAATCTCTCTACTTCTCAGCTTCTCTCATAAAATTTCTTGAAGGAGCTTGGGTTCCTATCGCGATTTCTCTTGTATTCCTGATCGTTATGTATGTCTGGCACTACGGAACTCTTAAGAAGTTTGAATTTGATATCCAAAACAAGGTTTCTATTAACTGGCTACTTAGTTTGGGTCGCAGCTTAGGCATTGTAAGAGTCCGTGGGATTGGTGTTGTACAGACAGAGCTTGTTTCGGGTATCCCCGGTATCTTCACCCACTTTGTCACCAATATTCCTGCCTTCCATCAAGTTCTTGTTTTCCTTTGCATCAAACATGTCCCAGTGCCACATGTAAGACCAGAAGAACGGTTTCTAATAGGTCGTATTGATACGAGTGAATACAGACTCTATCGGTGCATTGCACGATATGGGTATCGAGATGTTCACAAAGACGATGTAGAGTTTGAGAATGATCTTATATGCAGCATAGCAGAGTTTATAAGGTCAGGGACTCCACAGTCCAGTGATTGTAAACTGGACTTTGATACAGACGGTGAAAAGATGTCTGTCGTCGGGACATCTTCTAACCATGAAGATAGGATTCAGATGGCCGAGACCGATAACGATGAAGACTCTGAAGAACTGTACCAAGCTTCAGATACAAGAGAAATAAGGTCACCAGCTCCAGTTCAATTGAGAAAAAGAGTACGCTTCATCTTACCCGAGAGCCCGAAAATCAACACCGATGCAATGGAAGAATTACATGACCTAAGGGAAGCAAGAGAAGGAGGAGTAGCTTACATAATAGGACGATCACACATGAAATCAAAACAAGGATCAAGCATGCTGAAAAGGGTGTCGATTGACTTCATTTACGAGTTCTTGAGAAAAAACAGCAGAGAAGCTGACTTCCCAGTAGGTTTATCACATTCATCATCAACTCTTGAGGTGGGTATGATGTATCTTGTTTAA 2304 41.67 MVMDLESGVVSEKNAKKDSWKTILMMAYQSLGVVYGELGTSPLYVYRNTFAEEDISHSKSNDEIYGVLSFVFWTLTIVPLLKYIFIVLKADDNGEGGTFALYSLLCRHARVSSLPNTQLADSELTEYKMNVLGPSSQQSFGFKLKSALEKRRVLQKFLLVLALIGTCMVIGDGILTPAISDIVIPIACVVLICLFALQHYGTHRIGFLFAPIVIVWLLCISVIGLYNIIHWNPRVYRAISPRYMFQFLKKTQKGGWMSLGGIMLCITGSEAMFADLGHFSQLSIKIAFTFMVYPSLLLAYMGQAAYLSQHHPSSNEHPIGFYVSVPDKLKWPVLIIAVLAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKVHGQIYIPEVNWILMLLCLAVTLGFRDTKRLGHASGLAVITVMLVTTCLMSLVIVLCWHRSVFLAIGFIFFFGTIESLYFSASLIKFLEGAWVPIAISLVFLIVMYVWHYGTLKKFEFDIQNKVSINWLLSLGRSLGIVRVRGIGVVQTELVSGIPGIFTHFVTNIPAFHQVLVFLCIKHVPVPHVRPEERFLIGRIDTSEYRLYRCIARYGYRDVHKDDVEFENDLICSIAEFIRSGTPQSSDCKLDFDTDGEKMSVVGTSSNHEDRIQMAETDNDEDSEELYQASDTREIRSPAPVQLRKRVRFILPESPKINTDAMEELHDLREAREGGVAYIIGRSHMKSKQGSSMLKRVSIDFIYEFLRKNSREADFPVGLSHSSSTLEVGMMYLV 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3288116 3294484 - MELO3C012009.2.1 Cme10g00509 339395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00509 767 MobiDBLite consensus disorder prediction 649 668 - -
Cme10g00509 767 PANTHER POTASSIUM TRANSPORTER 6 3 766 - -
Cme10g00509 767 TIGRFAM kup: potassium uptake protein 26 765 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme10g00509 767 Pfam K+ potassium transporter 28 591 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme10g00509 767 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 3 766 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01960 Cme-Chr6:23800564 Cme10g00509 Cme-Chr10:3288116 0 dispersed
Cme09g00365 Cme-Chr9:3119634 Cme10g00509 Cme-Chr10:3288116 5.62E-73 dispersed
Cme10g00509 Cme-Chr10:3288116 Cme10g01233 Cme-Chr10:12843721 0 dispersed
Cme01g01949 Cme-Chr1:27894392 Cme10g00509 Cme-Chr10:3288116 5.54E-29 transposed
Cme10g00509 Cme-Chr10:3288116 Cme04g01908 Cme-Chr4:26778147 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00509 K03549 - csv:101212925 1469.91