Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme10g00545 ATGGAGGACAACGGCGGAGCCATGGGAGCACCTCACCAGAGGAAATTCTCTCTTCCGGTTGACTCCGAACACAAATCCACCAAATTCAACATATTCTCCGTCGCAGCTCCCCACATGCGAACGTTTCACCTCTCTTGGATTTCCTTCTGCGCTTGTTTCATTTCCAGTTTCGCCGCCGCTCCTCTGCTTCCGGTGATTCGTGACAACCTGAATTTAACCGATACCGACATTGGGAACGCCGGAATCGCCTCCGTCTCCGGCGCCGTGTTCGCAAGAATCATGATGGGTTCGGCTTGCGATTTAGTCGGACCACGTATCGCCTCTGCTTCGCTCATCCTCATAACTTCACCGGCGGTTTATTTAACCTCTATAGTCTCATCCCCTGTTACGTTTTTCCTCGCCCGATTCTTCACCGGATTCTCCCTCGCTACATTCGTCTCAACCCAATTCTGGATGAGCTCCATGTTCTCCTCCAACGTCGTCGGCACCGCCAATGGCGTCGCCGGCGGCTGGGGGAACTTAGGCGGCGGCGCAACACAGTTAATCATGCCGTATGTTTTCGCCATAATCGAACATATTGGCGCAACGAAATTCACTGCGTGGAGAATCGCTTTCTTCATCCCAGCTTTATTCCAAACGCTTTCCGCCTTCGCGGTTCTCCTCCTTGGCGAGGACACGCCAGACGGGAACTTCGGGCGGCTGAAGAAAACAGGGGAAAAGGCAAAAGACAAATTCTCAAAAGTTTTGTACAACGGGGTGACGAACTACAGAGGATGGATTCTGGCATTGACTTATGGGTATTGTTTTGGAGTGGAACTGACGATTGATAATGTAATAGCGAATTACTTTTACGATCGGTTTGATTTGAATCTGCATACGGCGGGGATAGTGGCGGCGAGTTTTGGGCTAGCGAATCTGTTTTCGAGGCCGTACGGCGGAGTATTGTCAGATGTGGTGGCGAAGAGATATGGGATGAGGGGGAGATTATGGGCTTTGTGGTTGGTTCAAACAATTGGAGGAATTTTGTGTGTTGTTCTTGGATTGGTTGATTCTTTGAGTTCTTCCATTGCTATTATGCTTATCTTTTCAGTGTTCGTTCAAGCTGCTTGTGGACTTACTTTTGGTGTCGTTCCTTTCGTCTCCCGAAGGTCACTAGGAGTAATATCAGGGATGACAGGCGGGGGTGGGAACGTCGGGTCAGTGCTGACACAGCTAATATTCTTTAGAGGCAACAGATACACAAAAGAAACAGGAATAACTCTAATGGGAGTGATGATAATAGCTTGCACTCTACCAATTGTATTGATTTATTTTCCTCAATGGGGAAGTATGCTTTTAGGGCCATCTTCCAAAATCGCTTCTGAGGAAGATTATTACTTATCTGAATGGAGCGATGAGGAGAAGACCAAAGGCTATCATATAGGAAGCCTTAAGTTTGCTGAGAATAGTAGAAGTGAAAGAGGCAAACCCCTTAAAGGAACCGCTGATGCTGATGATGATTCCCCGTCTCATGTTTAA 1518 48.02 MEDNGGAMGAPHQRKFSLPVDSEHKSTKFNIFSVAAPHMRTFHLSWISFCACFISSFAAAPLLPVIRDNLNLTDTDIGNAGIASVSGAVFARIMMGSACDLVGPRIASASLILITSPAVYLTSIVSSPVTFFLARFFTGFSLATFVSTQFWMSSMFSSNVVGTANGVAGGWGNLGGGATQLIMPYVFAIIEHIGATKFTAWRIAFFIPALFQTLSAFAVLLLGEDTPDGNFGRLKKTGEKAKDKFSKVLYNGVTNYRGWILALTYGYCFGVELTIDNVIANYFYDRFDLNLHTAGIVAASFGLANLFSRPYGGVLSDVVAKRYGMRGRLWALWLVQTIGGILCVVLGLVDSLSSSIAIMLIFSVFVQAACGLTFGVVPFVSRRSLGVISGMTGGGGNVGSVLTQLIFFRGNRYTKETGITLMGVMIIACTLPIVLIYFPQWGSMLLGPSSKIASEEDYYLSEWSDEEKTKGYHIGSLKFAENSRSERGKPLKGTADADDDSPSHV 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3479549 3482127 - MELO3C011976.2.1 Cme10g00545 339431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme10g00545 505 Gene3D MFS general substrate transporter like domains 240 443 IPR036259 -
Cme10g00545 505 SUPERFAMILY MFS general substrate transporter 35 438 IPR036259 -
Cme10g00545 505 MobiDBLite consensus disorder prediction 481 505 - -
Cme10g00545 505 Gene3D MFS general substrate transporter like domains 35 230 IPR036259 -
Cme10g00545 505 CDD MFS_NRT2_like 42 435 IPR044772 GO:0015112
Cme10g00545 505 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 8 490 - -
Cme10g00545 505 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 8 490 IPR044772 GO:0015112
Cme10g00545 505 Pfam Major Facilitator Superfamily 46 402 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00545 Cme-Chr10:3479549 Cme12g00377 Cme-Chr12:5256421 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme10g00545 K02575 - csv:101212365 918.687